PROTEIN: HRGMv2_2952_3_55
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Protein File & Metadata
Source:
HRGMv2_2952_3_55.pdb
Genome ID:
Protein ID:
HRGMv2_2952_3_55
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Protein Sequence
MSLTVRPLLP VTGQRVELVF TPDPPRRLEE GKTYTIRLTP LSGFRCYSAG KSVDTTAFAD 60 FDAWRPVTAE QGQLRLPVRF PQEDEYRIRV LDGDAEIGCP RVYALDPDLH AAYPLKGDLH 120 NHTYLSDGRE SPAYVIAALR KKGADFASIT DHGWYEPSLE AVNFWKDLQT DFLILPGEEV 180 HAPDCQVHIL SVGGRFSVNS WGYDTASDYR EKLEQERRAL PSNLDEDDRT RIAASQAIFD 240 KAREAGALSL FCHPFWETAD GFDIHEDVTR YLLDHRRFDA LEVIGGYWPH EYRDNLFQTV 300 YYYQYGVQTG ALLPLLGCSD CHSTDSGLFT GLFYSIVFAE DNTFDAIAKA VRQGRSVAVK 360 ALPGQMPEAF GDYRYVRLCA FLFDRVFPEH DRLCESEGER MRQAVFGRQE SLDELKKPSR 420 RMLSYYDSLK 430
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0D2GG65-F1-model_v4 | 109 | 388 | 173 | 450 | 0.4514 |
0.7258 |
| AF-Q54IG4-F1-model_v4 | 82 | 399 | 131 | 361 | 0.4248 |
0.8165 |
| AF-Q54B73-F1-model_v4 | 47 | 399 | 130 | 359 | 0.4195 |
0.8202 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B3DWM3-F1-model_v4 | GT28 | 107 | 430 | 392 | 645 | 0.3833 |
0.7537 |
| WCB91666.1 | GT4 | 49 | 414 | 85 | 663 | 0.3791 |
0.5389 |
| QYM64029.1 | GH38 | 102 | 386 | 68 | 326 | 0.3396 |
0.7456 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WCB91666.1 | GT4 | 49 | 414 | 85 | 663 | 0.3791 |
0.5389 |
| A0A6N3IC75 | GT4 | 87 | 408 | 6 | 314 | 0.3483 |
0.6276 |
| A0A7M2WZ79 | GT4 | 23 | 405 | 12 | 316 | 0.3439 |
0.6334 |
| A0A9E9HFY6 | GT4 | 10 | 403 | 1 | 313 | 0.3427 |
0.6194 |
| QYM64029.1 | GH38 | 102 | 386 | 68 | 326 | 0.3396 |
0.7456 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3e38-assembly1.cif.gz_B | 102 | 388 | 10 | 280 | 0.5333 |
0.7494 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.