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PROTEIN: HRGMv2_2940_41_8

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2940_41_8.pdb
Genome ID:
HRGMv2_2940
Protein ID:
HRGMv2_2940_41_8

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKLHGIEIPV   KNAPKLDPAF   IPILKFNRAF   LATAKKPVSI   AVERADGQMA   ACRTFVHGTP 60
EMAAADHYYV   NRLVKTILWM   KGGFKIYVAG   DEGTYSYLKR   AYSAGGEQAF   DFDYMANIFE 120
RPFEVVLVDQ   IPAAKDSPKK   MGGHLEGCRI   GFDAGGSDRK   VSAVIDGESV   YSEEVVWFPK 180
VTADPDYHYD   GIVAALKSAA   AHLPRVDAVG   VSSAGVYINN   RTMNASLFLK   VPKDLFDAKV 240
KDIYIRAITD   TFGDVPFEVV   NDGDVSALAG   TMSLGEPNVL   GIAMGTSEAV   GYVDGEGRIT 300
GWLNELAFVP   VDCHPDAMED   EWSHDIGCGV   KYFSQDAVIK   LAPRAGIELD   ESLPPAEKLK 360
VVQRLMAEDS   AAAADVYSTI   GTYLGHTLAY   YYDLYHCKHV   LLLGRVMSGK   GGDIVLAEAK 420
RVLADEYPEL   TGELFPTLPD   EKFRRVGQSA   AAASLPELKK 460
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-I6Y8D3-F1-model_v4 147 459 1 302 0.7286 0.889
AF-Q8DNV3-F1-model_v4 146 460 1 294 0.7014 0.8661
AF-Q8ZLQ8-F1-model_v4 147 459 1 290 0.7005 0.8719
AF-P45425-F1-model_v4 147 460 1 290 0.6991 0.8705
AF-Q8ZRE5-F1-model_v4 148 460 1 302 0.6961 0.8512
AF-P23917-F1-model_v4 148 460 1 302 0.6952 0.8502
AF-K0F0J8-F1-model_v4 147 458 1 293 0.6941 0.8711
AF-A0A0H3GKA4-F1-model_v4 148 460 1 303 0.6939 0.849
AF-Q32BB7-F1-model_v4 145 460 10 302 0.6935 0.8722
AF-Q8ZL71-F1-model_v4 146 460 1 293 0.6894 0.8529
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A165R9S5 GH13_31 145 460 78 375 0.5964 0.8349
AF-A0A7L4W925-F1-model_v4 GH170 146 447 1 294 0.4988 0.8298
A0A497ZP30 GH1 146 460 295 618 0.478 0.7855
AF-A0A346SND6-F1-model_v4 GH1 146 460 452 775 0.4403 0.7885
AF-M4W6Q6-F1-model_v4 GH1 146 460 452 775 0.4367 0.7809
AF-A0A5P9GJS8-F1-model_v4 GH1 146 460 452 778 0.4357 0.7781
AF-A0A222W361-F1-model_v4 GT2 146 460 366 654 0.4333 0.7811
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A165R9S5 GH13_31 145 460 78 375 0.5964 0.8349
A0A7L4W925 GH170 146 447 1 294 0.4988 0.8298
A0A497ZP30 GH1 146 460 295 618 0.478 0.7855
A0A5P9GJS8 GH1 146 460 452 778 0.4357 0.7781
A0A222W361 GT2 146 460 366 654 0.4333 0.7811
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2aa4-assembly1.cif.gz_B 147 459 1 289 0.7062 0.8785
3vov-assembly1.cif.gz_C 147 460 1 289 0.6991 0.8696
3vov-assembly1.cif.gz_D 147 460 1 296 0.6952 0.8572
3vov-assembly1.cif.gz_B 147 460 1 298 0.6951 0.8548
3vgk-assembly2.cif.gz_B 147 459 1 312 0.6914 0.8343
2qm1-assembly1.cif.gz_B 145 460 4 324 0.6913 0.8424
6jdo-assembly1.cif.gz_A 147 460 1 293 0.6869 0.8503
5nck-assembly1.cif.gz_B 147 460 1 291 0.6825 0.8474
6q26-assembly2.cif.gz_C 147 454 1 286 0.6794 0.8488
7p9l-assembly1.cif.gz_BBB 146 457 3 306 0.6736 0.8259
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-B7UJV5-F1-model_v4 147 460 1 291 0.705 0.8745
AF-B1IQQ7-F1-model_v4 147 460 1 291 0.705 0.8746
AF-A1AGB6-F1-model_v4 147 460 1 291 0.7049 0.8745
AF-B2U1W2-F1-model_v4 147 460 1 291 0.7048 0.8744
AF-A8A532-F1-model_v4 147 460 1 291 0.7048 0.8744
AF-Q0TCP4-F1-model_v4 147 460 1 291 0.7048 0.8743
AF-B7MBY4-F1-model_v4 147 460 1 291 0.7048 0.8743
AF-A7ZSB5-F1-model_v4 147 460 1 291 0.7048 0.8743
AF-A8AQB2-F1-model_v4 147 460 1 290 0.7048 0.8754
AF-B7LHT0-F1-model_v4 147 460 1 291 0.7047 0.8743
Download Full SwissProt Results