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PROTEIN: HRGMv2_2939_5_8

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2939_5_8.pdb
Genome ID:
HRGMv2_2939
Protein ID:
HRGMv2_2939_5_8

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKVLCLLLA   LLTTLCLFSG   CAGGETAPSS   EKTEGLTPLS   DPNAVPNLQG   YTITILTTDT 60
WVSGLSISDV   LPKFRQIEER   TGCTIVWETA   PSGGDFNTVL   QTRLTGDPSE   CPDIILLPTN 120
TTTLSKYISE   GLLFDLTKAY   DYCPNIKSFY   EEKRTDLKGS   FTYEDGGIYN   LLSNVSVTSE 180
DQRKNIAETG   DNAIWYRADI   AKKLGWKTYP   KTMDELHELL   TQVHKDYPDM   VPMHMYDWGG 240
WESAKIFNSA   YGLHFNNEEC   GTFFYPDENG   TVQFEPALEA   TKQWLTEINK   WYTEGLIVVG 300
NSEEQKIGAA   AKGVTFSGFY   ASVTEMCESA   LKQLEPDAYF   LYMPFPTAGD   STPTLMPRCD 360
YYNSFSIVDN   GDEEQCLAAA   QFLDYAFLSY   YGMCSEMLGV   EGEGWSLDEN   GKFTPNKDYI 420
AELLTGDKIR   EFSGANIHFN   GPTTFSYEIS   KAYRDARIQV   REEMGYADPM   NAEQKANWLE 480
INEINVSYYQ   SIYPLYYMQP   EDQDEYTRLY   SDIETYTQEM   LERYILGTAD   LNTFESEFVS 540
TLYNRLQLQK   VLDIQQKYYD   IYLENAAK 568
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 8 564 12 502 0.7287 0.8059
AF-A0A133D019-F1-model_v4 10 565 19 485 0.6422 0.7355
AF-K0EWS5-F1-model_v4 28 553 21 455 0.6038 0.7151
AF-P76042-F1-model_v4 31 551 21 430 0.5959 0.7222
AF-A0A133CSA1-F1-model_v4 34 548 21 427 0.5943 0.7224
AF-A0A133CDW9-F1-model_v4 1 557 8 444 0.5905 0.6889
AF-A0A132ZDH4-F1-model_v4 27 547 25 427 0.5862 0.7193
AF-A0A0H3GHK7-F1-model_v4 28 560 17 432 0.5782 0.6974
AF-K0F002-F1-model_v4 36 554 44 439 0.565 0.7117
AF-Q8DNU2-F1-model_v4 35 557 29 445 0.5626 0.6831
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 31 567 36 506 0.6546 0.7565
A0A9Q8PNJ5 GH4 1 554 150 866 0.4649 0.5804
AF-A0A7U1BNH7-F1-model_v4 GH10 26 557 23 742 0.4471 0.5464
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 31 567 36 506 0.6546 0.7565
A0A9Q8PNJ5 GH4 1 554 150 866 0.4649 0.5804
A0A7U1BNH7 GH10 26 557 23 742 0.4471 0.5464
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5g5y-assembly1.cif.gz_A 30 567 1 494 0.7623 0.8301
3omb-assembly1.cif.gz_A 25 564 1 503 0.7592 0.8194
6fth-assembly1.cif.gz_A 28 567 1 496 0.7566 0.8223
5xs8-assembly1.cif.gz_A 27 559 1 474 0.7091 0.7892
6jhx-assembly2.cif.gz_B 44 564 2 483 0.7001 0.7769
5h6u-assembly1.cif.gz_A 45 564 1 487 0.6998 0.7724
4tqu-assembly1.cif.gz_Q 44 567 3 492 0.699 0.7713
3vlw-assembly2.cif.gz_B 44 564 1 489 0.6961 0.7673
5g62-assembly2.cif.gz_B 27 567 1 491 0.69 0.7593
5suo-assembly1.cif.gz_A 50 568 1 451 0.6445 0.7361
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 20 568 23 538 0.7523 0.8202
AF-Q795R2-F1-model_v4 31 564 31 498 0.7239 0.8325
AF-P37966-F1-model_v4 30 564 28 502 0.7144 0.8144
AF-O31518-F1-model_v4 45 554 27 427 0.6028 0.7417
AF-Q2YKZ9-F1-model_v4 26 554 18 411 0.6017 0.7383
AF-Q8FVS7-F1-model_v4 27 554 19 411 0.6008 0.7397
AF-Q578M8-F1-model_v4 27 554 19 411 0.6002 0.7389
AF-P76042-F1-model_v4 31 551 21 430 0.5959 0.7222
AF-P94528-F1-model_v4 21 551 23 433 0.5791 0.7042
AF-Q9KEE7-F1-model_v4 15 554 19 445 0.5692 0.6784
Download Full SwissProt Results