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PROTEIN: HRGMv2_2939_5_5

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2939_5_5.pdb
Genome ID:
HRGMv2_2939
Protein ID:
HRGMv2_2939_5_5

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRKTMLLIL   AGLLLAATAV   AVIVLRPKGE   TLPEFGQALA   ASDWALDEGW   KAAEEDGVRL 60
LVAQSDGVTT   SWNTALSLEA   SWQVSADVRL   YDSGRERGCA   RLVFGDEFQN   VCVSVSVEYF 120
GTEYVRLTAD   ELLNRGTKSE   TDGWSNFYTD   EQWARIDPKQ   PLRLSVTHAA   EDNLLMLTLS 180
QNGSTLVQTF   TGEAHMELLE   TLRTVGLGAY   DADAVFSEIT   VERLE 225
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K7L993-F1-model_v4 32 225 32 264 0.6147 0.7805
AF-I1N1T0-F1-model_v4 32 225 30 265 0.6113 0.7776
AF-I1KX49-F1-model_v4 32 225 29 281 0.5971 0.7777
AF-K7LF03-F1-model_v4 34 225 46 283 0.5868 0.7734
AF-K7K1C6-F1-model_v4 33 225 48 288 0.5867 0.7737
AF-B6TNS1-F1-model_v4 35 225 19 217 0.5836 0.7363
AF-I1L3I1-F1-model_v4 32 225 33 291 0.5828 0.7832
AF-C0H550-F1-model_v4 17 225 52 292 0.5763 0.7349
AF-Q556P7-F1-model_v4 14 225 1 337 0.5705 0.7361
AF-A0A0R0I8A1-F1-model_v4 35 225 20 223 0.5658 0.7327
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H4P9X6-F1-model_v4 CBM0 34 225 36 245 0.6156 0.766
AF-A0A4P2QQG9-F1-model_v4 GH16 46 225 11 204 0.6134 0.751
AF-A0A2L0F7G1-F1-model_v4 GH16 34 225 32 252 0.6043 0.7638
AF-S4XW73-F1-model_v4 GH16 18 225 1 268 0.5988 0.7233
AF-A0A4P2Q4F7-F1-model_v4 GH16 34 225 41 261 0.5956 0.7634
AF-A0A445E618-F1-model_v4 GH16_27 35 225 34 230 0.5946 0.7284
AF-A0A2K1IRA9-F1-model_v4 GH16_27 34 224 39 235 0.5923 0.731
AF-B6TNS1-F1-model_v4 GH16_27 35 225 19 217 0.5837 0.7363
AF-A0A0A7HN71-F1-model_v4 GH16_27 35 225 19 217 0.5827 0.7349
AF-C6K7C4-F1-model_v4 GH16_27 35 224 20 206 0.5762 0.7214
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A9J7BT67 CBM66 31 224 33 217 0.6865 0.8342
A0A2R4FLE4 CBM66 33 225 18 190 0.6641 0.8181
A0A6C0GS63 CBM66 34 225 31 222 0.6501 0.7856
A0A6G8Q6V3 GH16 32 223 25 221 0.6078 0.7242
Q84IG1 GH16_21 23 224 21 264 0.6014 0.7389
A0A2K1IRA9 GH16_27 34 224 39 235 0.5923 0.731
A4C648 GH16_14 32 225 33 257 0.588 0.7508
A0A7M1STV4 GH16 19 224 17 304 0.5839 0.7462
APR88313.1 GH16 19 225 20 324 0.5839 0.7613
UYV18034.1 PL14 34 225 31 265 0.5826 0.75
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4b1m-assembly3.cif.gz_C 37 223 3 161 0.7278 0.8781
1dhk-assembly1.cif.gz_B-2 32 225 2 195 0.6815 0.7565
1viw-assembly1.cif.gz_B 32 225 2 197 0.6807 0.7614
5zbt-assembly1.cif.gz_A 31 225 3 212 0.6751 0.7787
2gn7-assembly1.cif.gz_A 31 225 1 224 0.6486 0.764
2gmm-assembly1.cif.gz_A 31 225 1 225 0.6461 0.7628
2gn3-assembly1.cif.gz_A 31 225 1 226 0.6443 0.7623
5t52-assembly1.cif.gz_B 33 225 2 228 0.6423 0.7702
1oq1-assembly2.cif.gz_B 34 225 7 218 0.6419 0.7606
5t7p-assembly1.cif.gz_A 33 225 3 227 0.6417 0.7699
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O31524-F1-model_v4 34 225 7 218 0.6435 0.7627
AF-P02873-F1-model_v4 32 225 25 228 0.6306 0.7754
AF-P19664-F1-model_v4 34 225 1 234 0.6297 0.7748
AF-P16270-F1-model_v4 33 225 26 254 0.6017 0.768
AF-Q40987-F1-model_v4 33 225 33 260 0.5981 0.77
AF-P16300-F1-model_v4 33 225 23 246 0.5972 0.7596
AF-P02872-F1-model_v4 33 225 26 252 0.5954 0.7697
AF-A9YWS4-F1-model_v4 33 225 38 278 0.5936 0.7717
AF-P58906-F1-model_v4 33 225 36 279 0.5935 0.7767
AF-Q41160-F1-model_v4 33 225 32 255 0.5914 0.7641
Download Full SwissProt Results