PROTEIN: HRGMv2_2937_3_40
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Protein File & Metadata
Source:
HRGMv2_2937_3_40.pdb
Genome ID:
Protein ID:
HRGMv2_2937_3_40
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Protein Sequence
MDKKNKATRY RQPDRIRHPE KIRHFDFSVK PKKPGPLFSV AKHILAWPDL RRRHAKIDKV 60 NMESLEGKPY LLLVTHSYFC DFAVMMKVTH PHPVINVMTL EGFNTYSAPL MRALGVIGKR 120 KFVQDFHLIR NMKYTVEKLK CIFCLFPEAR YSLDGCGSCI PESTASLVKL LGVPVVVLRI 180 HGNFVTCPQW NKIDKGTYIE GHAEPIITAQ ETQTLSKEEI FTRIRTNFTY DDFRWQAENR 240 IRIDHPRRAE GLHCLLYKCP HCGKEYETDS AGTELWCRAC GKRWEMDVYG QLHAKEGETE 300 YPHIPDWSAW ERDCVRHEIL SGTYRFESEA RIETLPGWKK FYKHGSGRLI QDMTGTYVIC 360 DNLYGKGEFT LHKKPLELDS VHIEYDYLGR GDAVDISVPD DSFWCYIRAR DAITKLSFAT 420 EELYQNARAR RQVPVRESTL CPAETPSAK 449
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O07808-F1-model_v4 | 33 | 368 | 1 | 251 | 0.6109 |
0.7949 |
| AF-Q9CDC0-F1-model_v4 | 33 | 366 | 1 | 257 | 0.6099 |
0.7868 |
| AF-K0EQL3-F1-model_v4 | 33 | 407 | 1 | 247 | 0.6066 |
0.794 |
| AF-K0EMF3-F1-model_v4 | 35 | 369 | 1 | 248 | 0.6062 |
0.7922 |
| AF-O07807-F1-model_v4 | 35 | 368 | 1 | 257 | 0.603 |
0.7815 |
| AF-O07809-F1-model_v4 | 32 | 368 | 1 | 255 | 0.6028 |
0.7898 |
| AF-Q5AEL8-F1-model_v4 | 1 | 408 | 16 | 293 | 0.5603 |
0.7226 |
| AF-Q9X7B0-F1-model_v4 | 26 | 436 | 211 | 736 | 0.4139 |
0.5704 |
| AF-Q8ZMA4-F1-model_v4 | 40 | 441 | 1 | 676 | 0.3769 |
0.5152 |
| AF-Q32C85-F1-model_v4 | 40 | 441 | 1 | 676 | 0.3765 |
0.5148 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-J9VR06-F1-model_v4 | GT4 | 1 | 438 | 9 | 596 | 0.3913 |
0.5123 |
| AF-E6R403-F1-model_v4 | GT4 | 1 | 438 | 9 | 604 | 0.3892 |
0.5126 |
| AF-Q5KIN5-F1-model_v4 | GT4 | 1 | 438 | 9 | 596 | 0.3795 |
0.4963 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WI59-F1-model_v4 | 21 | 438 | 18 | 591 | 0.4528 |
0.5675 |
| AF-B2HNJ0-F1-model_v4 | 26 | 436 | 215 | 740 | 0.4145 |
0.5746 |
| AF-Q9X7B0-F1-model_v4 | 26 | 436 | 211 | 736 | 0.4139 |
0.5704 |
| AF-B8ZRA3-F1-model_v4 | 26 | 436 | 211 | 736 | 0.4132 |
0.5699 |
| AF-C1AEU7-F1-model_v4 | 26 | 436 | 219 | 744 | 0.413 |
0.5721 |
| AF-A1KLH6-F1-model_v4 | 26 | 436 | 219 | 744 | 0.4115 |
0.5702 |
| AF-B3GXZ3-F1-model_v4 | 24 | 438 | 244 | 771 | 0.404 |
0.5644 |
| AF-A3N1B3-F1-model_v4 | 24 | 438 | 244 | 771 | 0.4035 |
0.5631 |
| AF-B7LF13-F1-model_v4 | 40 | 441 | 1 | 676 | 0.3774 |
0.5158 |
| AF-Q8FEA6-F1-model_v4 | 40 | 441 | 1 | 676 | 0.3771 |
0.5157 |