PROTEIN: HRGMv2_2932_12_9
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Protein File & Metadata
Source:
HRGMv2_2932_12_9.pdb
Genome ID:
Protein ID:
HRGMv2_2932_12_9
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Protein Sequence
MGKARLKSEY RHEKLSFSCT IVAAVFFVVL FHAPVMFTPD IVTQIFRPTI VFFLIITMTQ 60 RGKIDYSARA FALLAALYCS FVLLLNSISV DEITSAFSAT LYFLMFYAVA GTPWTKREVR 120 FIIMACFAGA FACAVVLFLS NDPTDLNVGV GGEMQMLGMH VNRNLNAYAF ATGTIIGVVY 180 LLYGKNKLWV GLLTAVIAYG LLYSQCRGAF FCAVLGVSIL VIGRLLKIRK RSEVKFLAYS 240 VLFILFCIAA YYILKNSELN RLIDGESKSG RDDGIKYAWQ LFQNSDVFSK IFGHGFSYEA 300 ANTEGIGVHV VYMTYLLSTG IIGCSLVVLM FVLVGLRVKG SIPYAFFFCA FLRTFFEGLD 360 YYIYIPLILS AIIYNYSINA GREAYELFTE KRI 393
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I1M9-F1-model_v4 | 15 | 382 | 40 | 454 | 0.6732 |
0.8002 |
| AF-Q5FA54-F1-model_v4 | 5 | 380 | 8 | 428 | 0.6095 |
0.7777 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q4JZZ9-F1-model_v4 | GT4 | 14 | 381 | 6 | 407 | 0.691 |
0.771 |
| AF-Q51524-F1-model_v4 | GT0 | 4 | 380 | 1 | 401 | 0.6674 |
0.7656 |
| AF-Q9K0K0-F1-model_v4 | GT0 | 5 | 380 | 8 | 428 | 0.6102 |
0.7783 |
| AF-G1FG65-F1-model_v4 | GT0 | 5 | 380 | 8 | 428 | 0.6099 |
0.7781 |
| AF-B5YD26-F1-model_v4 | GT9 | 13 | 392 | 40 | 559 | 0.595 |
0.8219 |
| AF-B8DZR6-F1-model_v4 | GT9 | 13 | 392 | 40 | 559 | 0.592 |
0.818 |
| UII34295.1 | GT4 | 13 | 382 | 13 | 420 | 0.5802 |
0.8213 |
| WBY01952.1 | GT9 | 8 | 382 | 5 | 412 | 0.5675 |
0.7893 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 14 | 381 | 21 | 445 | 0.5627 |
0.7892 |
| AF-D5MJ04-F1-model_v4 | GT9 | 13 | 383 | 23 | 417 | 0.5601 |
0.7882 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 14 | 381 | 6 | 407 | 0.691 |
0.771 |
| B5YD26 | GT9 | 13 | 392 | 40 | 559 | 0.595 |
0.8219 |
| UII34295.1 | GT4 | 13 | 382 | 13 | 420 | 0.5802 |
0.8213 |
| WBY01952.1 | GT9 | 8 | 382 | 5 | 412 | 0.5675 |
0.7893 |
| A0A517MXC4 | GT26 | 14 | 381 | 21 | 445 | 0.5627 |
0.7892 |
| A0A2P1NHY6 | GT4 | 1 | 382 | 2 | 443 | 0.5608 |
0.7871 |
| D5MJ04 | GT9 | 13 | 383 | 23 | 417 | 0.5601 |
0.7882 |
| D9S8K7 | GT4 | 12 | 392 | 10 | 403 | 0.5539 |
0.7658 |
| B8IGI7 | GH16_7 | 15 | 381 | 19 | 458 | 0.5441 |
0.7932 |
| R4KL74 | GT4 | 9 | 382 | 1 | 445 | 0.5436 |
0.7845 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P26471-F1-model_v4 | 12 | 380 | 12 | 404 | 0.7046 |
0.7784 |
| AF-Q6F7F9-F1-model_v4 | 12 | 379 | 5 | 404 | 0.6161 |
0.7739 |