PROTEIN: HRGMv2_2921_6_99
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Protein File & Metadata
Source:
HRGMv2_2921_6_99.pdb
Genome ID:
Protein ID:
HRGMv2_2921_6_99
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Protein Sequence
MQDDRLALYQ RECQNSPQIV HALQELPLIG EDAISIVCRY VLAPALGGFT QWLLKEACKA 60 QKQRLYFLAR DGYLMYRAAL LFCEKQRLPI ECRYLSCSRY SLRIPIFHLD TEAALAYLCR 120 GSLQISLERI LTRAGLTADE KEAVFQELSL PYGPTVRLSH TRLAQIHESL RQCSTFLAAM 180 NRHSAEAMPA LKGYLSQEGL LEDRTDAIVD SGWTGSMQMV LNEVLSHMGR IRPLSGYYWG 240 LYELPVHANR TLYHCYDFSP TSPLKAKVFF NNCLFEAIFT APHGMTTGYR KLGDQYVPHY 300 GFSDARRNAF VERIEAEIFP YIERLAEHTQ ILELSSEDLY NDRTIIQRLL QRFMAAPSPA 360 EVACFGSLPF SDDVLEGEEQ PIAFPLTEKE LTQSHPLHKL VAISGRGKLP PRESAWYEGS 420 VVRCGKHIRY HLWQYTLYQW MRYSRKRLMY MRGKRRDSRY G 461
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 10 | 433 | 207 | 631 | 0.6458 |
0.8154 |
| AF-Q0P8I2-F1-model_v4 | 1 | 441 | 68 | 975 | 0.4657 |
0.6733 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 10 | 449 | 635 | 1091 | 0.5817 |
0.8572 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 10 | 448 | 617 | 1067 | 0.5775 |
0.8472 |
| A0A1I7GMF6 | GT2 | 10 | 444 | 633 | 1083 | 0.5763 |
0.8565 |
| A0A974WXG9 | GT4 | 1 | 438 | 187 | 1075 | 0.5739 |
0.8512 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 29 | 441 | 8 | 403 | 0.5593 |
0.7693 |
| A0A9J7AXY3 | GT2 | 6 | 451 | 6 | 403 | 0.5473 |
0.7858 |
| V4JBH5 | GT2 | 2 | 443 | 2 | 397 | 0.5442 |
0.7941 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 26 | 441 | 6 | 405 | 0.5437 |
0.7976 |
| QRK05458.1 | GT4 | 12 | 452 | 249 | 988 | 0.5376 |
0.809 |
| A6M2M4 | GT2 | 3 | 456 | 211 | 918 | 0.5264 |
0.8004 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 10 | 448 | 617 | 1067 | 0.5775 |
0.8472 |
| A0A1I7GMF6 | GT2 | 10 | 444 | 633 | 1083 | 0.5763 |
0.8565 |
| A0A974WXG9 | GT4 | 1 | 438 | 187 | 1075 | 0.5739 |
0.8512 |
| A0A0U5F758 | GT2 | 29 | 441 | 8 | 403 | 0.5593 |
0.7693 |
| A0A9J7AXY3 | GT2 | 6 | 451 | 6 | 403 | 0.5473 |
0.7858 |
| V4JBH5 | GT2 | 2 | 443 | 2 | 397 | 0.5442 |
0.7941 |
| A0A0H3KC95 | GT2 | 26 | 441 | 6 | 405 | 0.5437 |
0.7976 |
| QRK05458.1 | GT4 | 12 | 452 | 249 | 988 | 0.5376 |
0.809 |
| A6M2M4 | GT2 | 3 | 456 | 211 | 918 | 0.5264 |
0.8004 |
| W8KPG0 | GT2 | 3 | 445 | 3 | 398 | 0.5259 |
0.7895 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 14 | 368 | 241 | 591 | 0.5771 |
0.8446 |
| 8a0m-assembly1.cif.gz_B | 4 | 437 | 458 | 876 | 0.5383 |
0.7984 |
| 8a0m-assembly2.cif.gz_C | 3 | 437 | 591 | 1024 | 0.53 |
0.7943 |
| 8a0c-assembly1.cif.gz_A | 4 | 437 | 596 | 1028 | 0.5294 |
0.796 |
| 8a0m-assembly1.cif.gz_A | 3 | 437 | 590 | 1023 | 0.5289 |
0.792 |
| 8a0c-assembly1.cif.gz_B | 4 | 437 | 596 | 1025 | 0.5253 |
0.794 |
| 8a0m-assembly2.cif.gz_D | 5 | 437 | 488 | 887 | 0.5095 |
0.7913 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.