PROTEIN: HRGMv2_2921_18_43
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Protein File & Metadata
Source:
HRGMv2_2921_18_43.pdb
Genome ID:
Protein ID:
HRGMv2_2921_18_43
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Protein Sequence
MRLQVLVVTR GQNDHRLVSQ MNLQSDAVFG NQCGRHISEI FCYNGYTIRY ESRAECGVGF 60 NRNTVWMYAD ADICLFADDD VRYWNGYTER VLAEFARHPE ADVILFNFHS TNPKRQEYQI 120 PKWTRVHWYN ALRYGTYRIA VRTARVQQVH LAFSLLFGGG ARYGSGEDTI FLHDCCKRGL 180 RIYASPLFLG EVSHLTSTWF EGYTPKFFHD KGALLAHLFP RLAKPFGFLL LLRHPEFLSN 240 GLGFQKAYQY LNEGIQEYLG RPLKEVSHEK TADLRQQ 277
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57022-F1-model_v4 | 1 | 238 | 4 | 245 | 0.6959 |
0.7886 |
| AF-H9L470-F1-model_v4 | 1 | 240 | 1 | 240 | 0.6935 |
0.7785 |
| AF-Q9HUG5-F1-model_v4 | 1 | 252 | 10 | 276 | 0.6873 |
0.7962 |
| AF-O24928-F1-model_v4 | 1 | 237 | 2 | 243 | 0.6839 |
0.7891 |
| AF-P71239-F1-model_v4 | 1 | 240 | 1 | 240 | 0.6834 |
0.769 |
| AF-Q48215-F1-model_v4 | 1 | 243 | 1 | 256 | 0.6802 |
0.7796 |
| AF-K0F1F2-F1-model_v4 | 1 | 243 | 1 | 265 | 0.6785 |
0.7945 |
| AF-Q48214-F1-model_v4 | 2 | 248 | 1 | 263 | 0.6774 |
0.7988 |
| AF-K0EVS3-F1-model_v4 | 1 | 243 | 2 | 264 | 0.6771 |
0.7956 |
| AF-Q9I5M1-F1-model_v4 | 1 | 252 | 17 | 278 | 0.6737 |
0.7869 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-M1VJV8-F1-model_v4 | GT0 | 1 | 261 | 1 | 259 | 0.9359 |
0.9782 |
| AF-Q4K0D3-F1-model_v4 | GT0 | 1 | 261 | 1 | 258 | 0.9354 |
0.9793 |
| AF-Q4K092-F1-model_v4 | GT0 | 1 | 261 | 1 | 258 | 0.9341 |
0.9782 |
| AF-A0A3Q9BL69-F1-model_v4 | GT2 | 1 | 260 | 1 | 259 | 0.9335 |
0.9736 |
| AF-A0A7Z2S0H0-F1-model_v4 | GT2 | 1 | 262 | 1 | 261 | 0.9327 |
0.9697 |
| AF-A0A6G7WG53-F1-model_v4 | GT2 | 1 | 258 | 1 | 257 | 0.9317 |
0.975 |
| QTE74990.1 | GT0 | 1 | 261 | 2 | 255 | 0.9274 |
0.98 |
| AF-A0A1S6IMD8-F1-model_v4 | GT2 | 1 | 259 | 1 | 258 | 0.9271 |
0.9694 |
| UKS64973.1 | GT0 | 1 | 262 | 1 | 263 | 0.9261 |
0.9815 |
| AF-A0A516QZC6-F1-model_v4 | GT0 | 1 | 261 | 1 | 262 | 0.9256 |
0.9716 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1S6IMD8 | GT2 | 1 | 259 | 1 | 258 | 0.9271 |
0.9694 |
| USL25724.1 | GT2 | 1 | 262 | 1 | 264 | 0.9142 |
0.9609 |
| WHY86074.1 | GT2 | 1 | 261 | 1 | 261 | 0.9037 |
0.9575 |
| WBL14826.1 | GT2 | 1 | 261 | 1 | 262 | 0.9023 |
0.9528 |
| QIH75555.1 | GT2 | 1 | 260 | 1 | 257 | 0.8996 |
0.9466 |
| QZO08130.1 | GT2 | 1 | 260 | 1 | 260 | 0.8942 |
0.9503 |
| R6RPS1 | GT2 | 1 | 261 | 2 | 259 | 0.8893 |
0.9471 |
| UJH89864.1 | GT2 | 1 | 251 | 1 | 247 | 0.877 |
0.9409 |
| A0A385JP17 | GT2 | 1 | 261 | 1 | 266 | 0.8516 |
0.9064 |
| A0A246G9K6 | GT2 | 1 | 261 | 1 | 270 | 0.8485 |
0.9042 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6h4m-assembly4.cif.gz_Q | 1 | 260 | 2 | 279 | 0.6466 |
0.7477 |
| 5tzj-assembly1.cif.gz_C | 1 | 266 | 1 | 309 | 0.6445 |
0.7633 |
| 6h4m-assembly3.cif.gz_P | 1 | 260 | 2 | 270 | 0.6441 |
0.7366 |
| 6h4m-assembly2.cif.gz_H | 1 | 260 | 2 | 283 | 0.6441 |
0.7496 |
| 6h4m-assembly1.cif.gz_B | 1 | 260 | 2 | 282 | 0.6424 |
0.746 |
| 6h4m-assembly2.cif.gz_I | 1 | 259 | 2 | 279 | 0.6409 |
0.7446 |
| 6hnq-assembly2.cif.gz_H | 1 | 260 | 3 | 283 | 0.6408 |
0.7461 |
| 5hea-assembly1.cif.gz_A | 1 | 256 | 2 | 265 | 0.6404 |
0.713 |
| 6hnq-assembly4.cif.gz_Q | 1 | 260 | 2 | 280 | 0.6404 |
0.742 |
| 6hnq-assembly2.cif.gz_O | 1 | 260 | 2 | 281 | 0.6393 |
0.7415 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q03084-F1-model_v4 | 1 | 241 | 6 | 260 | 0.7023 |
0.8193 |
| AF-B5L3F2-F1-model_v4 | 1 | 239 | 4 | 245 | 0.7005 |
0.7939 |
| AF-O32268-F1-model_v4 | 1 | 238 | 6 | 248 | 0.6997 |
0.7953 |
| AF-Q46635-F1-model_v4 | 2 | 241 | 1 | 253 | 0.6988 |
0.8075 |
| AF-Q57022-F1-model_v4 | 1 | 238 | 4 | 245 | 0.6959 |
0.7886 |
| AF-Q077R2-F1-model_v4 | 1 | 236 | 2 | 239 | 0.6918 |
0.791 |
| AF-Q4KXC9-F1-model_v4 | 1 | 240 | 7 | 254 | 0.6891 |
0.7821 |
| AF-P71239-F1-model_v4 | 1 | 240 | 1 | 240 | 0.6834 |
0.769 |
| AF-P71054-F1-model_v4 | 1 | 241 | 5 | 256 | 0.6827 |
0.8025 |
| AF-D4GYH3-F1-model_v4 | 1 | 260 | 1 | 309 | 0.6809 |
0.7871 |