PROTEIN: HRGMv2_2921_18_40
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Protein File & Metadata
Source:
HRGMv2_2921_18_40.pdb
Genome ID:
Protein ID:
HRGMv2_2921_18_40
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Protein Sequence
MRTRATAKNV LWGLFQQAVL CFLGFFSRRV MLNTIGTTGV GLNALLTNVL SALTLAEMGI 60 GTVIVYHLYR PLAQGDKREV CRLIQFYRTT YRKVAGAITG LGLLAIPFLP SLTKGVSYSR 120 LYVAAVFLLF LAQMVCSYFF SYQRSLLSAD QKQYIVSIVD LLFRGCSTIG GVLVLLLTHE 180 LLVYLVFRFF TSLFNHLALS KQVNRLYPYL KQAKEPLSPE RKKLLFFDVR DRFTGKLSWT 240 LTSCMDNLFI SLLVGTVQVG LYSNYTIVFH TLTNGVNQIS AAMSGSIGNL LATGSKEQVD 300 STLQKLLFAM YWIATFCSTC LFCLIDPFIS FVFGPAMVLD RPIVEICILN FFLMTMRIPL 360 WNMVGASGLF KKDKYISLFG ASVNLIVSFI LGSHLGMLGI FIGTTCTYAT QFLLKTILFY 420 HCFLQRSCAT FLKKIGLYLF LSLAIAGTAH RICIWISTGT ALLDFVLQGL ASAAFPLAIN 480 TVLFFHTDSF HSLCQSFVKL LHHTNHSGQK GGEPSESII 519
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 1 | 502 | 3 | 476 | 0.8267 |
0.8822 |
| AF-H9L497-F1-model_v4 | 1 | 501 | 2 | 482 | 0.8171 |
0.8749 |
| AF-A0A0H3GSJ3-F1-model_v4 | 1 | 501 | 2 | 477 | 0.8131 |
0.8674 |
| AF-Q58467-F1-model_v4 | 1 | 515 | 5 | 507 | 0.809 |
0.8451 |
| AF-Q2FXH6-F1-model_v4 | 1 | 499 | 2 | 544 | 0.8088 |
0.8817 |
| AF-P77377-F1-model_v4 | 1 | 499 | 5 | 481 | 0.8063 |
0.8704 |
| AF-Q8DPI1-F1-model_v4 | 1 | 505 | 3 | 492 | 0.792 |
0.8375 |
| AF-Q32ET1-F1-model_v4 | 1 | 519 | 2 | 511 | 0.7917 |
0.8203 |
| AF-A0A133CZZ9-F1-model_v4 | 1 | 501 | 16 | 542 | 0.7905 |
0.8566 |
| AF-Q2G0R7-F1-model_v4 | 1 | 499 | 5 | 500 | 0.7898 |
0.8362 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 515 | 4 | 514 | 0.8248 |
0.8535 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 502 | 40 | 545 | 0.7677 |
0.8298 |
| QJC17489.1 | GT2 | 1 | 506 | 342 | 846 | 0.7115 |
0.9111 |
| QNU38870.1 | GT4 | 1 | 498 | 1 | 474 | 0.7078 |
0.8425 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 513 | 8 | 754 | 0.6726 |
0.8597 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 3 | 519 | 1 | 558 | 0.6674 |
0.8328 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 516 | 1 | 593 | 0.6597 |
0.8481 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 517 | 11 | 822 | 0.6543 |
0.8579 |
| A0A4V3CWU6 | GT4 | 6 | 494 | 1 | 550 | 0.6443 |
0.8481 |
| AF-D7BDH0-F1-model_v4 | GT4 | 1 | 516 | 1 | 522 | 0.6439 |
0.8253 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 515 | 4 | 514 | 0.8248 |
0.8535 |
| A0A160T2N7 | GT28 | 1 | 502 | 40 | 545 | 0.7677 |
0.8298 |
| QJC17489.1 | GT2 | 1 | 506 | 342 | 846 | 0.7115 |
0.9111 |
| QNU38870.1 | GT4 | 1 | 498 | 1 | 474 | 0.7078 |
0.8425 |
| A0A517Z2I8 | GT2 | 1 | 513 | 8 | 754 | 0.6726 |
0.8597 |
| A0A2U8PPB3 | GT4 | 3 | 519 | 1 | 558 | 0.6674 |
0.8328 |
| A0A3Q9G719 | GT4 | 1 | 516 | 1 | 593 | 0.6597 |
0.8481 |
| D1BIF1 | GT4 | 1 | 517 | 11 | 822 | 0.6543 |
0.8579 |
| A0A4V3CWU6 | GT4 | 6 | 494 | 1 | 550 | 0.6443 |
0.8481 |
| D7BDH0 | GT4 | 1 | 516 | 1 | 522 | 0.6439 |
0.8253 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7wag-assembly1.cif.gz_A | 1 | 519 | 1 | 520 | 0.7998 |
0.8223 |
| 7waw-assembly1.cif.gz_A | 8 | 493 | 1 | 496 | 0.7978 |
0.8507 |
| 6nc6-assembly2.cif.gz_B | 4 | 491 | 1 | 461 | 0.7598 |
0.824 |
| 6cc4-assembly1.cif.gz_A | 1 | 499 | 44 | 608 | 0.7349 |
0.8369 |
| 6fhz-assembly1.cif.gz_A | 3 | 428 | 5 | 437 | 0.7217 |
0.8225 |
| 5y50-assembly1.cif.gz_A | 1 | 425 | 5 | 437 | 0.7181 |
0.8266 |
| 4mlb-assembly1.cif.gz_C | 1 | 426 | 8 | 449 | 0.7062 |
0.8152 |
| 5xjj-assembly1.cif.gz_A | 1 | 425 | 6 | 438 | 0.7031 |
0.8109 |
| 6gwh-assembly1.cif.gz_A | 1 | 426 | 4 | 436 | 0.6991 |
0.7977 |
| 7php-assembly1.cif.gz_A | 1 | 426 | 7 | 446 | 0.6969 |
0.8075 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 4 | 505 | 1 | 502 | 0.8704 |
0.9021 |
| AF-Q48457-F1-model_v4 | 1 | 504 | 4 | 485 | 0.8282 |
0.8791 |
| AF-O34674-F1-model_v4 | 1 | 501 | 3 | 537 | 0.811 |
0.8747 |
| AF-Q58467-F1-model_v4 | 1 | 515 | 5 | 507 | 0.809 |
0.8451 |
| AF-P33699-F1-model_v4 | 1 | 503 | 5 | 485 | 0.8074 |
0.8668 |
| AF-P77377-F1-model_v4 | 1 | 499 | 5 | 481 | 0.8063 |
0.8704 |
| AF-P0AF16-F1-model_v4 | 1 | 519 | 2 | 511 | 0.7869 |
0.8158 |
| AF-B4E9G3-F1-model_v4 | 1 | 519 | 2 | 516 | 0.7841 |
0.8095 |
| AF-D4GU68-F1-model_v4 | 1 | 506 | 2 | 472 | 0.7833 |
0.8417 |
| AF-P37169-F1-model_v4 | 1 | 518 | 15 | 524 | 0.7821 |
0.8196 |