PROTEIN: HRGMv2_2920_4_22
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Protein File & Metadata
Source:
HRGMv2_2920_4_22.pdb
Genome ID:
Protein ID:
HRGMv2_2920_4_22
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Protein Sequence
MTRPYGERLA QYRSLLGEDP ALAPLSPNLA PGDPAGAVAG LVLAPALGGF TQWLLAWAKG 60 RGIKRLYFLA RDGYCFLRAA RSLSDALGLG LDCRYLCCSR QALRLPLFHL DPQRGLDALC 120 RNSMDLTLDK LLARAGLAPG ERQAWGKALA LPFGLGERLP RTALPQVRRA LERSPVLLCL 180 LEERSKAALP ALAGYLQQEG LLEDVPCALV DSGWLGSLQQ GLQTALSLLG RPAPLEGCYF 240 GLYQVPTEMD RARYHSYLFA PEGPLGAKAR FNNCVFEAVF TAPHGMTLGY RRAGGRWLPV 300 LGEGGGHPLL GKLLPFFDQY LTGLAALCRE QGLAAGLTQR REAVRRLLGT FFNAPWPQEA 360 ELFGSLPFSD EAAEGKPTPL AAPLTDQELM RSHGPARLLA QAGLCRPCRE SAWPQASAVL 420 YSAHPRRRLG EQALYQTLRS LKQQAHHT 448
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 10 | 430 | 206 | 631 | 0.6543 |
0.8192 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 13 | 448 | 635 | 1091 | 0.5772 |
0.8421 |
| A0A974WXG9 | GT4 | 1 | 438 | 187 | 1078 | 0.5752 |
0.8377 |
| A0A1I7GMF6 | GT2 | 13 | 441 | 633 | 1083 | 0.5747 |
0.8492 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 13 | 444 | 617 | 1067 | 0.5742 |
0.8395 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 5 | 438 | 5 | 403 | 0.5599 |
0.7541 |
| A0A9J7AXY3 | GT2 | 2 | 445 | 2 | 400 | 0.5537 |
0.7792 |
| V4JBH5 | GT2 | 5 | 441 | 1 | 398 | 0.5478 |
0.783 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 27 | 441 | 6 | 405 | 0.5417 |
0.7813 |
| QRK05458.1 | GT4 | 15 | 448 | 249 | 988 | 0.535 |
0.8019 |
| AF-W8KPG0-F1-model_v4 | GT2 | 7 | 442 | 2 | 398 | 0.5304 |
0.7823 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 438 | 187 | 1078 | 0.5752 |
0.8377 |
| A0A1I7GMF6 | GT2 | 13 | 441 | 633 | 1083 | 0.5747 |
0.8492 |
| A0A2I6S8V6 | GT2 | 13 | 444 | 617 | 1067 | 0.5742 |
0.8395 |
| A0A0U5F758 | GT2 | 5 | 438 | 5 | 403 | 0.5599 |
0.7541 |
| A0A9J7AXY3 | GT2 | 2 | 445 | 2 | 400 | 0.5537 |
0.7792 |
| V4JBH5 | GT2 | 5 | 441 | 1 | 398 | 0.5478 |
0.783 |
| A0A0H3KC95 | GT2 | 27 | 441 | 6 | 405 | 0.5417 |
0.7813 |
| QRK05458.1 | GT4 | 15 | 448 | 249 | 988 | 0.535 |
0.8019 |
| W8KPG0 | GT2 | 7 | 442 | 2 | 398 | 0.5304 |
0.7823 |
| M4S1R1 | GT4 | 15 | 438 | 219 | 723 | 0.5263 |
0.7766 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 17 | 366 | 241 | 591 | 0.5718 |
0.8261 |
| 8a0m-assembly1.cif.gz_B | 7 | 434 | 458 | 876 | 0.5524 |
0.8061 |
| 8a0m-assembly2.cif.gz_C | 6 | 434 | 591 | 1024 | 0.5484 |
0.8166 |
| 8a0c-assembly1.cif.gz_A | 7 | 436 | 596 | 1027 | 0.5479 |
0.8146 |
| 8a0m-assembly1.cif.gz_A | 6 | 434 | 590 | 1023 | 0.5478 |
0.8154 |
| 8a0c-assembly1.cif.gz_B | 7 | 434 | 596 | 1025 | 0.5382 |
0.8033 |
| 8a0m-assembly2.cif.gz_D | 7 | 434 | 487 | 887 | 0.5223 |
0.7961 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.