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PROTEIN: HRGMv2_2920_21_25

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Protein File & Metadata
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Source:
HRGMv2_2920_21_25.pdb
Genome ID:
HRGMv2_2920
Protein ID:
HRGMv2_2920_21_25

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Protein Sequence 
MSVGTVTTGD   PGTQAAVTNS   GTENNAVLDF   TIPQGAAGTN   PPVQLLSAYS   IPAQAGTTST 60
PLVFDRTGVS   YGTAAEHTAN   SPDFTITQPG   VYTLAFSGSF   APGNGAAFPL   NVGITAQLGG 120
TDIPGASAQH   TFQSASDVAS   LSFTVPFAVT   AAPATLQVVG   AGTSFLYSDL   SAAITRNGDI 180
PTT 183
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-F1QHG9-F1-model_v4 4 180 10 183 0.6543 0.7183
AF-F1QVK6-F1-model_v4 21 180 33 202 0.638 0.785
AF-F1QSF7-F1-model_v4 4 177 15 199 0.6219 0.701
AF-B8JLI7-F1-model_v4 35 179 46 208 0.6209 0.8422
AF-E7FG60-F1-model_v4 20 180 47 216 0.6206 0.7804
AF-P02746-F1-model_v4 13 182 45 252 0.5998 0.7636
AF-F1R093-F1-model_v4 1 180 54 225 0.5921 0.716
AF-F1R2B9-F1-model_v4 20 180 64 231 0.5867 0.7587
AF-O75888-F1-model_v4 2 177 87 250 0.5797 0.7569
AF-A0A2R8RKM0-F1-model_v4 1 180 82 236 0.579 0.779
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A5J6U2G0-F1-model_v4 GH0 7 179 31 339 0.5303 0.7381
AF-A0A7H8M6P9-F1-model_v4 GH0 3 178 33 341 0.5292 0.7262
AF-A0A3Q9FUK6-F1-model_v4 GH184 8 182 3 298 0.5279 0.6956
A0A8I1IN83 GH55 40 177 406 548 0.4124 0.811
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A3Q9FUK6 GH184 8 182 3 298 0.5279 0.6956
A0A9Y1MSP8 GH43 1 178 114 590 0.4466 0.7077
A0A8I1IN83 GH55 40 177 406 548 0.4124 0.811
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3twi-assembly1.cif.gz_C 39 179 1 136 0.7558 0.8852
2z5w-assembly1.cif.gz_A 39 179 1 136 0.7551 0.8845
3tyj-assembly1.cif.gz_A 38 178 1 136 0.751 0.8797
2r6q-assembly1.cif.gz_A 38 178 3 138 0.7456 0.8803
7x9g-assembly1.cif.gz_B 42 181 1 143 0.7428 0.8722
8d02-assembly1.cif.gz_A 41 178 1 148 0.7312 0.8855
1rj8-assembly2.cif.gz_G 43 181 1 140 0.731 0.8551
7r1m-assembly1.cif.gz_C 41 182 1 152 0.7267 0.8709
7r5i-assembly1.cif.gz_A 41 183 1 141 0.7192 0.8335
7r5i-assembly1.cif.gz_C 41 182 1 148 0.7144 0.8449
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P02746-F1-model_v4 13 182 45 252 0.5998 0.7636
AF-Q06575-F1-model_v4 1 179 49 196 0.5972 0.7772
AF-Q9JHG0-F1-model_v4 36 180 45 197 0.5888 0.7792
AF-O75888-F1-model_v4 2 177 87 250 0.5797 0.7569
AF-P98087-F1-model_v4 9 180 74 224 0.5771 0.7774
AF-Q2KIT0-F1-model_v4 19 177 48 191 0.5759 0.7608
AF-Q5T7M4-F1-model_v4 5 179 79 302 0.5744 0.7594
AF-Q8BGU2-F1-model_v4 9 180 76 224 0.5742 0.7837
AF-Q8IUK8-F1-model_v4 9 180 74 224 0.574 0.7734
AF-Q9D777-F1-model_v4 7 177 90 241 0.5727 0.7889
Download Full SwissProt Results