dbCAN Logo

PROTEIN: HRGMv2_2919_26_3

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_2919_26_3.pdb
Genome ID:
HRGMv2_2919
Protein ID:
HRGMv2_2919_26_3

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MEYLGVSYEA   RHLPKLDPQF   IPFGAWMEAY   QKGAQQPLAI   AVERDQGHIS   VHHTKIHGTP 60
QMAEADYRYV   ERFVKFLLWS   VGGFRIYICG   CSPLAKRLKA   AYTLTGERKF   DAQFMQDVYE 120
VPMEVVDLPL   DQCPKANEAA   RPIGGHLDGC   RIGFDAGGSD   RKVSAVVDGR   TVYSEEVVWH 180
PKTQEDPQYH   FDGIVEAFRT   AASKMPRVDA   IGVSSAGVFI   GNAPMVSSLF   IRVPREKRDL 240
VKTIYDRAAR   ELGEIPIVVA   NDGDVTALAG   AMGLECGCVM   GMAMGTSEAV   GYVDRDGNVL 300
GWLNELAFAP   VDLNEEAMVD   EWSTDRGVGC   KYFSQDAVIK   LAPRAGIQLD   ESLTPAEKLK 360
VVQGLMEQDD   PRAEEIYDSI   GAYLAYTVAL   YSQFYEIQHL   IVLGRVMSGK   GGNRILASCQ 420
AILEAEYPQL   ARSVRVMLPD   EKTRRVGQSV   AAASLPEIQK 460
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-I6Y8D3-F1-model_v4 149 459 1 302 0.7233 0.8828
AF-Q8DNV3-F1-model_v4 148 460 1 294 0.6971 0.861
AF-Q8ZRE5-F1-model_v4 150 460 1 302 0.6961 0.8509
AF-P45425-F1-model_v4 149 460 1 290 0.6961 0.8668
AF-P23917-F1-model_v4 150 460 1 302 0.695 0.8496
AF-Q8ZLQ8-F1-model_v4 149 460 1 290 0.6949 0.8655
AF-A0A133CQB1-F1-model_v4 148 460 2 320 0.6939 0.8462
AF-A0A0H3GKA4-F1-model_v4 150 460 1 303 0.6936 0.8484
AF-Q32BB7-F1-model_v4 147 460 10 302 0.6881 0.8656
AF-Q8DQN3-F1-model_v4 147 458 7 325 0.6869 0.8471
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A165R9S5 GH13_31 147 460 78 375 0.5925 0.8292
AF-A0A7L4W925-F1-model_v4 GH170 148 447 1 294 0.4969 0.8263
A0A497ZP30 GH1 148 460 295 618 0.4722 0.7787
AF-A0A346SND6-F1-model_v4 GH1 148 460 452 775 0.4352 0.7818
AF-M4W6Q6-F1-model_v4 GH1 148 460 452 775 0.4308 0.7723
AF-A0A5P9GJS8-F1-model_v4 GH1 148 460 452 778 0.4305 0.7716
AF-A0A222W361-F1-model_v4 GT2 148 460 366 654 0.4294 0.7727
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A165R9S5 GH13_31 147 460 78 375 0.5925 0.8292
A0A7L4W925 GH170 148 447 1 294 0.4969 0.8263
A0A497ZP30 GH1 148 460 295 618 0.4722 0.7787
A0A5P9GJS8 GH1 148 460 452 778 0.4305 0.7716
A0A222W361 GT2 148 460 366 654 0.4294 0.7727
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2aa4-assembly1.cif.gz_B 149 459 1 289 0.702 0.8735
3vov-assembly1.cif.gz_C 149 460 1 289 0.6978 0.8679
3vov-assembly1.cif.gz_B 149 460 1 298 0.6928 0.8523
2qm1-assembly1.cif.gz_B 147 460 4 324 0.6927 0.849
3vov-assembly1.cif.gz_D 149 460 1 296 0.6926 0.8543
6jdo-assembly1.cif.gz_A 149 460 1 293 0.6912 0.8554
3vgk-assembly2.cif.gz_B 149 459 1 312 0.6854 0.83
2ap1-assembly1.cif.gz_A 148 459 1 305 0.6803 0.8296
5nck-assembly1.cif.gz_B 149 460 1 291 0.6728 0.8364
6q26-assembly2.cif.gz_C 149 454 1 286 0.6709 0.8392
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q668J9-F1-model_v4 148 460 1 290 0.7038 0.8739
AF-Q1C5U9-F1-model_v4 148 460 1 290 0.7037 0.8739
AF-A7FG96-F1-model_v4 148 460 1 290 0.7033 0.8735
AF-A9QZJ5-F1-model_v4 148 460 1 290 0.703 0.8731
AF-B2K945-F1-model_v4 148 460 1 290 0.703 0.8731
AF-Q1CJY6-F1-model_v4 148 460 1 290 0.7028 0.8729
AF-Q8ZCG9-F1-model_v4 148 460 1 290 0.7025 0.8725
AF-B1JFW2-F1-model_v4 148 460 1 290 0.7019 0.8718
AF-A4TMJ3-F1-model_v4 148 460 1 290 0.7015 0.8713
AF-B1IQQ7-F1-model_v4 149 460 1 291 0.7 0.8685
Download Full SwissProt Results