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PROTEIN: HRGMv2_2917_62_4

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2917_62_4.pdb
Genome ID:
HRGMv2_2917
Protein ID:
HRGMv2_2917_62_4

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Detailed structural information will appear here after analysis...

Protein Sequence 
METDKIYKKN   IGFYQKQINK   CRAFSAAAKA   QNPDTENVIN   FVGCYVLGPA   LFMFTRFLIL 60
SAKKDNVQRI   YFLARDGFLP   YKAAKIIQSR   YHINLDIRYL   SLSRLSLNGA   LLFIDKDYCF 120
DYLFLSTKGL   TSLGVLKRAG   LTENEAKNFF   YSLKTGFDIS   APLTKPQKSK   LKHALYTNAG 180
FYELVKARSR   GRFDLLIQYL   KQEGLMDNTP   FAIADSGWAG   TTQYSLKLAL   DKAGARPRFY 240
GYYWGLYRYK   AAFEQKYARC   FYFYPCNGFF   TKLYFNNNLI   EAAFAAPHGT   TIGYVKSGQS 300
IQPLYSHEKL   DLKLGAALEF   VKSALANTNK   KEFFCGNTKT   ELKILKSLLK   RLMYRPSPTE 360
AKKVGSLYFT   DDMFENKNKL   DDMFENKNTL   EYMIENKNTL   EDMSENKNTL   EDMSENKNTL 420
EDMLDTKNTL   EDMFDTKNTL   LNKGWPRANI   MLGKSGQPCF   FIYNCLRHVK   GTFLALKDRW 480
VFKLESKT 488
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8ZQU8-F1-model_v4 15 460 207 623 0.5999 0.7908
AF-Q0P8I2-F1-model_v4 1 473 59 976 0.4279 0.5984
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-W0DNV7-F1-model_v4 GT2 16 480 650 1091 0.523 0.7936
AF-A0A2I6S8V6-F1-model_v4 GT2 14 476 629 1067 0.5222 0.7906
A0A1I7GMF6 GT2 16 473 648 1083 0.5198 0.7974
A0A974WXG9 GT4 1 459 128 1069 0.5188 0.7632
AF-A0A0U5F758-F1-model_v4 GT2 33 443 7 555 0.5115 0.6996
V4JBH5 GT2 33 422 1 663 0.5083 0.7724
A0A9J7AXY3 GT2 3 488 3 753 0.5082 0.628
QRK05458.1 GT4 17 488 249 1018 0.5005 0.733
AF-U5MZQ8-F1-model_v4 GT2 1 457 131 971 0.5002 0.7247
U5MZQ8 GT2 1 457 131 971 0.5002 0.7247
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A2I6S8V6 GT2 14 476 629 1067 0.5222 0.7906
A0A1I7GMF6 GT2 16 473 648 1083 0.5198 0.7974
A0A974WXG9 GT4 1 459 128 1069 0.5188 0.7632
A0A0U5F758 GT2 33 443 7 555 0.5115 0.6996
V4JBH5 GT2 33 422 1 663 0.5083 0.7724
A0A9J7AXY3 GT2 3 488 3 753 0.5082 0.628
QRK05458.1 GT4 17 488 249 1018 0.5005 0.733
U5MZQ8 GT2 1 457 131 971 0.5002 0.7247
WAJ24550.1 GT2 1 457 133 965 0.4964 0.7166
A0A975E9I4 GT2 2 461 407 1004 0.495 0.7068
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7shg-assembly1.cif.gz_A 19 367 241 591 0.554 0.8388
8a0m-assembly1.cif.gz_B 10 458 459 880 0.4975 0.7577
8a0m-assembly2.cif.gz_C 8 458 594 1028 0.4919 0.7619
8a0c-assembly1.cif.gz_A 8 458 598 1032 0.4914 0.7616
8a0m-assembly1.cif.gz_A 8 458 593 1027 0.4914 0.7608
8a0c-assembly1.cif.gz_B 10 458 597 1029 0.4876 0.7577
8a0m-assembly2.cif.gz_D 11 458 489 891 0.4715 0.7514
Download Full PDB Results
Structural Homologs - SwissProt