PROTEIN: HRGMv2_2910_4_15
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Protein File & Metadata
Source:
HRGMv2_2910_4_15.pdb
Genome ID:
Protein ID:
HRGMv2_2910_4_15
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Protein Sequence
MDSAPVILAR ALGDFTQWAL GRALAAGVRR LYFLSRDGWY PFRLGEALCR GWDLPIECRY 60 LYGSRRAWRL PLAHRDPARL VGQLCGKGGG ATLGDILFQA GLSPREAGAA AASLGLPQEL 120 PLSPRQRREL APRLLACPAF LHPMEAASRR AVGPFLGYLR QEGLGEDVPW AVVDSGWMGS 180 IQDTLGEALT LLGRPGSPRG YYAGLYRAPR RGQWEGFFFQ PGERLAIQAG FEPSLWEAAF 240 SAPHGTVLGY GPRDGGFVPL LGEARPSPAA ARLEEAFTQW GEHLARQPRP KDLVSRARRD 300 LPGLWEELRP LMARPTGEQA ALLGRLPFSQ GPRERPGERL APRLSQGELA GSCLLPRLLG 360 RQAASSWLPG SAARSVPQPE KWFAAFDRLR LARALSFGLR EGRER 405
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 1 | 381 | 240 | 628 | 0.6431 |
0.8369 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 1 | 402 | 672 | 1091 | 0.5704 |
0.8413 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 1 | 391 | 11 | 402 | 0.569 |
0.7412 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 1 | 399 | 654 | 1067 | 0.569 |
0.8399 |
| A0A9J7AXY3 | GT2 | 1 | 405 | 10 | 432 | 0.5681 |
0.7479 |
| A0A1I7GMF6 | GT2 | 1 | 395 | 666 | 1083 | 0.5667 |
0.848 |
| A0A974WXG9 | GT4 | 1 | 388 | 675 | 1074 | 0.5614 |
0.8579 |
| V4JBH5 | GT2 | 1 | 393 | 5 | 396 | 0.5599 |
0.7682 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 1 | 392 | 12 | 405 | 0.5563 |
0.7728 |
| AF-W8KPG0-F1-model_v4 | GT2 | 1 | 395 | 9 | 397 | 0.5407 |
0.767 |
| QRK05458.1 | GT4 | 1 | 402 | 273 | 988 | 0.5382 |
0.8115 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 1 | 399 | 654 | 1067 | 0.569 |
0.8399 |
| A0A0U5F758 | GT2 | 1 | 391 | 11 | 402 | 0.569 |
0.7412 |
| A0A9J7AXY3 | GT2 | 1 | 405 | 10 | 432 | 0.5681 |
0.7479 |
| A0A1I7GMF6 | GT2 | 1 | 395 | 666 | 1083 | 0.5667 |
0.848 |
| A0A974WXG9 | GT4 | 1 | 388 | 675 | 1074 | 0.5614 |
0.8579 |
| V4JBH5 | GT2 | 1 | 393 | 5 | 396 | 0.5599 |
0.7682 |
| A0A0H3KC95 | GT2 | 1 | 392 | 12 | 405 | 0.5563 |
0.7728 |
| W8KPG0 | GT2 | 1 | 395 | 9 | 397 | 0.5407 |
0.767 |
| QRK05458.1 | GT4 | 1 | 402 | 273 | 988 | 0.5382 |
0.8115 |
| M4S1R1 | GT4 | 1 | 388 | 231 | 699 | 0.5335 |
0.803 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 1 | 326 | 255 | 591 | 0.5826 |
0.8533 |
| 8a0m-assembly1.cif.gz_B | 1 | 388 | 504 | 876 | 0.5343 |
0.8149 |
| 8a0m-assembly2.cif.gz_C | 1 | 388 | 624 | 1024 | 0.5338 |
0.8173 |
| 8a0c-assembly1.cif.gz_A | 1 | 389 | 642 | 1027 | 0.5331 |
0.8208 |
| 8a0m-assembly1.cif.gz_A | 1 | 388 | 623 | 1023 | 0.5328 |
0.8158 |
| 8a0c-assembly1.cif.gz_B | 1 | 388 | 642 | 1025 | 0.5243 |
0.8104 |
| 8a0m-assembly2.cif.gz_D | 1 | 388 | 533 | 887 | 0.5025 |
0.8032 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.