PROTEIN: HRGMv2_2908_6_127
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Protein File & Metadata
Source:
HRGMv2_2908_6_127.pdb
Genome ID:
Protein ID:
HRGMv2_2908_6_127
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Protein Sequence
MKKRILALLL AGAMLLGMAA CNGGGGDSSS GTESGGASDG ASTGDTGDEG DASTEDLPWL 60 EYDIIIGYST PATTLDNPND VVSPYVEEKF HIRVGEVAQV ATSDIPFRQM LATRIAAGNE 120 PDVFLGGSEN VAYALSTGKY GDNLEEQIAQ MDNLNKYMDQ SMWPRFTTDG QRKQIPLVMV 180 NTSNEEFTSD PYNQPFTSWA LWTREDLLAA CGYSFTPLAE IDEEYCQKGE VPPEEVFAIE 240 PAIDTPEKLA DYLQQIADLG IKVGDRDLIP MSLISWSQFH VGTMFETGHW AIEESGEING 300 FLGGSGTKEY YQWLNDLYNR GLLDADFISQ MDDQLQQKVA SGLVGVGMMV PNMATARESL 360 LASNPEAMIR YIPWPKQEGT SGGSFDIYES GFNRVTVSNS FEGIDRLCEM WDWMYSDEGL 420 DILTWGPEGT GIWEYADDGT TKVFVDPETE EDCLGGIIGE KGADYYGLYE WTGGYFPFMS 480 EIAICSPAMS NYNPMSYLRS YPAEPDIYKV NQSYCYTGGY NFDGTASYGD GTDDVAVVNN 540 YYWADWAETD CAKVVTCSPE EFDAVFDEAQ QNFYKETDYE NAQARMETWF EENTGWTPQG 600
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 54 | 595 | 32 | 502 | 0.68 |
0.7997 |
| AF-P76042-F1-model_v4 | 50 | 585 | 19 | 430 | 0.5958 |
0.7342 |
| AF-Q8DNU8-F1-model_v4 | 55 | 585 | 35 | 440 | 0.5928 |
0.7488 |
| AF-A0A132ZDH4-F1-model_v4 | 54 | 578 | 26 | 427 | 0.5847 |
0.7334 |
| AF-A0A133CPC5-F1-model_v4 | 53 | 585 | 28 | 423 | 0.5736 |
0.7252 |
| AF-A0A133CDW9-F1-model_v4 | 58 | 588 | 42 | 444 | 0.5723 |
0.7291 |
| AF-K0F2E6-F1-model_v4 | 58 | 592 | 42 | 441 | 0.5718 |
0.732 |
| AF-K0F002-F1-model_v4 | 58 | 585 | 45 | 439 | 0.5678 |
0.7323 |
| AF-K0F1Y0-F1-model_v4 | 59 | 585 | 50 | 433 | 0.5589 |
0.7323 |
| AF-P9WGU9-F1-model_v4 | 58 | 582 | 30 | 462 | 0.549 |
0.674 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 54 | 597 | 40 | 506 | 0.6277 |
0.7482 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 54 | 597 | 40 | 506 | 0.6277 |
0.7482 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fth-assembly1.cif.gz_A | 56 | 596 | 1 | 496 | 0.6995 |
0.7804 |
| 3omb-assembly1.cif.gz_A | 55 | 595 | 3 | 503 | 0.6932 |
0.7716 |
| 5g5y-assembly1.cif.gz_A | 55 | 596 | 1 | 492 | 0.6926 |
0.7777 |
| 5xs8-assembly1.cif.gz_A | 59 | 590 | 1 | 474 | 0.659 |
0.7523 |
| 5h6u-assembly1.cif.gz_A | 54 | 597 | 2 | 487 | 0.6507 |
0.7366 |
| 3vlw-assembly2.cif.gz_B | 54 | 597 | 4 | 489 | 0.649 |
0.7364 |
| 4tqu-assembly1.cif.gz_Q | 54 | 599 | 5 | 492 | 0.6489 |
0.7357 |
| 6jhx-assembly2.cif.gz_B | 54 | 597 | 5 | 483 | 0.6446 |
0.7361 |
| 5g62-assembly2.cif.gz_B | 59 | 597 | 1 | 491 | 0.6401 |
0.7209 |
| 3u1o-assembly2.cif.gz_B | 56 | 582 | 1 | 406 | 0.6375 |
0.7737 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37966-F1-model_v4 | 52 | 595 | 27 | 502 | 0.6745 |
0.7859 |
| AF-A0A0H2URD6-F1-model_v4 | 50 | 596 | 38 | 536 | 0.6713 |
0.7747 |
| AF-P76042-F1-model_v4 | 50 | 585 | 19 | 430 | 0.5958 |
0.7342 |
| AF-Q7LYW7-F1-model_v4 | 42 | 585 | 6 | 450 | 0.568 |
0.6698 |
| AF-O32156-F1-model_v4 | 58 | 588 | 28 | 422 | 0.5676 |
0.7185 |
| AF-P9WGU8-F1-model_v4 | 58 | 582 | 30 | 462 | 0.5497 |
0.6748 |
| AF-P9WGU9-F1-model_v4 | 58 | 582 | 30 | 462 | 0.549 |
0.674 |
| AF-Q9V297-F1-model_v4 | 20 | 585 | 37 | 453 | 0.535 |
0.6692 |
| AF-P58300-F1-model_v4 | 33 | 585 | 38 | 434 | 0.5323 |
0.6802 |
| AF-O58758-F1-model_v4 | 54 | 585 | 39 | 420 | 0.5314 |
0.6886 |