PROTEIN: HRGMv2_2908_2_148
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2908_2_148.pdb
Genome ID:
Protein ID:
HRGMv2_2908_2_148
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MGDRVLCQVG REVLAPALGG FTQWVLGRAL GQGVERLYFL SRDGWYGYRL SKVLCRAWNL 60 PLDCRYLYGS RYAWRLPLYH WDLPGAVAQL CGPGQPAALR GLLARAGLSP VEQGAVLAWL 120 KLPGEQVLTR GERRALGREL LACPAFLRGV ERHSRQALPA FLGYLRQKGL LEPVPWALVD 180 SGWMGTTQET LGQALRLLGG SSSLRGYYAG LYQGPSLGRG EGYFFSPGRE LQVQAGFEPG 240 LFEAVFSAPQ GMTLGYEFRE GRAVPRLAKA SLCRKKQDLG QVFLAYGRTL AGEQPPPKGL 300 EARGEAVRSQ MWGRLHRLMA SPTRQQAEAL GELAFSSGLL EEDTFLAPKL TRKELSRNRL 360 LPRLALGEGT VSSGWLPGSA ALVERDPAPW FAAFDRVRWA RALRLGAKAV MKQEGYPWKN 420 GKKGGNTGL 429
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 2 | 389 | 239 | 628 | 0.6339 |
0.8366 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0U5F758-F1-model_v4 | GT2 | 1 | 397 | 8 | 403 | 0.5678 |
0.7524 |
| A0A9J7AXY3 | GT2 | 1 | 410 | 5 | 430 | 0.566 |
0.7599 |
| V4JBH5 | GT2 | 1 | 406 | 2 | 658 | 0.5596 |
0.7678 |
| AF-W0DNV7-F1-model_v4 | GT2 | 2 | 408 | 671 | 1091 | 0.5572 |
0.8424 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 3 | 407 | 652 | 1067 | 0.5555 |
0.8384 |
| A0A1I7GMF6 | GT2 | 1 | 403 | 668 | 1083 | 0.5542 |
0.844 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 1 | 400 | 8 | 405 | 0.5485 |
0.7757 |
| A0A974WXG9 | GT4 | 3 | 396 | 675 | 1074 | 0.5458 |
0.8533 |
| AF-W8KPG0-F1-model_v4 | GT2 | 2 | 413 | 7 | 682 | 0.5337 |
0.7419 |
| QRK05458.1 | GT4 | 1 | 414 | 269 | 991 | 0.5254 |
0.7999 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0U5F758 | GT2 | 1 | 397 | 8 | 403 | 0.5678 |
0.7524 |
| A0A9J7AXY3 | GT2 | 1 | 410 | 5 | 430 | 0.566 |
0.7599 |
| V4JBH5 | GT2 | 1 | 406 | 2 | 658 | 0.5596 |
0.7678 |
| A0A2I6S8V6 | GT2 | 3 | 407 | 652 | 1067 | 0.5555 |
0.8384 |
| A0A1I7GMF6 | GT2 | 1 | 403 | 668 | 1083 | 0.5542 |
0.844 |
| A0A0H3KC95 | GT2 | 1 | 400 | 8 | 405 | 0.5485 |
0.7757 |
| A0A974WXG9 | GT4 | 3 | 396 | 675 | 1074 | 0.5458 |
0.8533 |
| W8KPG0 | GT2 | 2 | 413 | 7 | 682 | 0.5337 |
0.7419 |
| QRK05458.1 | GT4 | 1 | 414 | 269 | 991 | 0.5254 |
0.7999 |
| M4S1R1 | GT4 | 8 | 396 | 256 | 699 | 0.5127 |
0.7977 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 4 | 333 | 253 | 591 | 0.5699 |
0.8507 |
| 8a0m-assembly1.cif.gz_B | 1 | 396 | 501 | 876 | 0.5245 |
0.822 |
| 8a0m-assembly2.cif.gz_C | 1 | 396 | 635 | 1024 | 0.5215 |
0.8245 |
| 8a0m-assembly1.cif.gz_A | 1 | 396 | 634 | 1023 | 0.5207 |
0.8229 |
| 8a0c-assembly1.cif.gz_A | 1 | 396 | 639 | 1028 | 0.5205 |
0.8236 |
| 8a0c-assembly1.cif.gz_B | 1 | 396 | 639 | 1025 | 0.5144 |
0.8183 |
| 8a0m-assembly2.cif.gz_D | 1 | 395 | 530 | 886 | 0.4938 |
0.8142 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.