PROTEIN: HRGMv2_2907_20_17
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Protein File & Metadata
Source:
HRGMv2_2907_20_17.pdb
Genome ID:
Protein ID:
HRGMv2_2907_20_17
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Protein Sequence
MSMKTAFLVT NGNMGGTAGD ATLILRRAKA MYEEKEIYTK ILLLDPVPQG DVNRGDFYYS 60 IETCASAAAL KQRILAESPD LLILYGDKIQ MMTAGLHRFL QKHRPQTKLV LDIQGAVEEK 120 KEYAVSFLRR HVVYPVSKWS FGHALRHADA AFVVSDEIRD KCERACGSRA GRLSYYKVRC 180 GFETLADTAA VQAYRAEFRA AKHLAESTCV FCYSGYRAGW QKVEDIIEHF RRFDAAYPDC 240 YFAFFCNTDA SFEALLKEKF PRGNYCVELL RPEAYFKSLC GCDVGYILRD YNETNRVAFP 300 NKFSDYLSSG LILALNRALP EPMRVISALP DHYVDTDTVL ADIDGLFAKL DARAADYAGF 360 VQASLDLGAR ELLYRAQVRK LTL 383
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EXF1-F1-model_v4 | 2 | 383 | 1 | 373 | 0.802 |
0.8361 |
| AF-X8F781-F1-model_v4 | 3 | 383 | 1 | 377 | 0.7992 |
0.8343 |
| AF-P9WMZ3-F1-model_v4 | 3 | 383 | 1 | 377 | 0.7947 |
0.8303 |
| AF-Q58469-F1-model_v4 | 1 | 383 | 1 | 387 | 0.794 |
0.8249 |
| AF-Q7AQE2-F1-model_v4 | 3 | 383 | 1 | 377 | 0.7917 |
0.8262 |
| AF-Q2G1J7-F1-model_v4 | 1 | 383 | 1 | 399 | 0.7894 |
0.8276 |
| AF-Q5F734-F1-model_v4 | 1 | 383 | 2 | 354 | 0.7886 |
0.8408 |
| AF-A0A0H3GSJ8-F1-model_v4 | 1 | 383 | 1 | 346 | 0.782 |
0.8508 |
| AF-A0A133CHU6-F1-model_v4 | 4 | 383 | 1 | 375 | 0.7772 |
0.8343 |
| AF-Q9HZ80-F1-model_v4 | 4 | 383 | 1 | 407 | 0.7739 |
0.8284 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A173S1M9 | GT0 | 2 | 383 | 1 | 390 | 0.852 |
0.8828 |
| AF-A0A127B301-F1-model_v4 | GT4 | 1 | 383 | 1 | 402 | 0.8297 |
0.8708 |
| AF-G0J2U0-F1-model_v4 | GT0 | 4 | 383 | 1 | 392 | 0.8296 |
0.8682 |
| AF-A0A0E4BF99-F1-model_v4 | GT0 | 1 | 383 | 1 | 390 | 0.8293 |
0.8631 |
| A0A937JZA8 | GT4 | 4 | 383 | 1 | 392 | 0.8281 |
0.8653 |
| A0A1T3IYS5 | GT4 | 4 | 383 | 1 | 378 | 0.8267 |
0.8535 |
| R5J685 | GT0 | 1 | 383 | 1 | 405 | 0.8264 |
0.8685 |
| UPR55348.1 | GT4 | 3 | 383 | 1 | 388 | 0.826 |
0.8574 |
| AF-M9YRR6-F1-model_v4 | GT0 | 4 | 383 | 1 | 394 | 0.823 |
0.8777 |
| AF-A0A7L7L432-F1-model_v4 | GT4 | 1 | 383 | 1 | 402 | 0.8214 |
0.8741 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| ALZ64270.1 | GT4 | 2 | 383 | 2 | 385 | 0.8549 |
0.8782 |
| AXV66459.1 | GT4 | 4 | 383 | 1 | 388 | 0.8411 |
0.8741 |
| QVW33803.1 | GT4 | 5 | 383 | 1 | 387 | 0.8371 |
0.8698 |
| UOE80914.1 | GT4 | 4 | 383 | 1 | 393 | 0.8332 |
0.8686 |
| A0A937JZA8 | GT4 | 4 | 383 | 1 | 392 | 0.8281 |
0.8653 |
| A0A1T3IYS5 | GT4 | 4 | 383 | 1 | 378 | 0.8267 |
0.8535 |
| UPR55348.1 | GT4 | 3 | 383 | 1 | 388 | 0.826 |
0.8574 |
| A0A5B8UUB6 | GT4 | 1 | 383 | 1 | 404 | 0.825 |
0.8689 |
| A0A4P8RP76 | GT4 | 1 | 383 | 2 | 394 | 0.8227 |
0.8602 |
| H6L8Q4 | GT4 | 4 | 383 | 1 | 395 | 0.8211 |
0.8631 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3oka-assembly1.cif.gz_A | 3 | 383 | 1 | 372 | 0.8014 |
0.8405 |
| 2jjm-assembly1.cif.gz_B | 3 | 383 | 1 | 355 | 0.7714 |
0.8259 |
| 3mbo-assembly1.cif.gz_B | 2 | 383 | 1 | 362 | 0.7696 |
0.819 |
| 5d00-assembly1.cif.gz_B | 1 | 383 | 1 | 356 | 0.7667 |
0.8206 |
| 3mbo-assembly4.cif.gz_G | 2 | 383 | 1 | 358 | 0.7666 |
0.8194 |
| 3mbo-assembly3.cif.gz_F | 3 | 383 | 1 | 362 | 0.7658 |
0.8154 |
| 7mi0-assembly1.cif.gz_A | 1 | 383 | 1 | 372 | 0.7649 |
0.8037 |
| 5d01-assembly1.cif.gz_B | 1 | 383 | 1 | 355 | 0.7627 |
0.8175 |
| 5d00-assembly1.cif.gz_A | 1 | 383 | 1 | 355 | 0.7609 |
0.8168 |
| 7qsg-assembly1.cif.gz_A | 1 | 383 | 1 | 371 | 0.7593 |
0.7979 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8NNK8-F1-model_v4 | 1 | 383 | 2 | 375 | 0.8025 |
0.8405 |
| AF-P9WMZ2-F1-model_v4 | 3 | 383 | 1 | 377 | 0.7955 |
0.8308 |
| AF-Q93P60-F1-model_v4 | 4 | 383 | 1 | 384 | 0.7954 |
0.8365 |
| AF-P9WMZ3-F1-model_v4 | 3 | 383 | 1 | 377 | 0.7947 |
0.8303 |
| AF-Q58469-F1-model_v4 | 1 | 383 | 1 | 387 | 0.794 |
0.8249 |
| AF-P46915-F1-model_v4 | 3 | 383 | 1 | 373 | 0.7815 |
0.817 |
| AF-O32267-F1-model_v4 | 1 | 383 | 4 | 393 | 0.7763 |
0.8102 |
| AF-Q46634-F1-model_v4 | 3 | 383 | 1 | 350 | 0.7726 |
0.8286 |
| AF-Q8KIU8-F1-model_v4 | 2 | 383 | 1 | 390 | 0.7681 |
0.8072 |
| AF-Q59002-F1-model_v4 | 4 | 383 | 1 | 381 | 0.7648 |
0.8005 |