PROTEIN: HRGMv2_2898_3_79
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2898_3_79.pdb
Genome ID:
Protein ID:
HRGMv2_2898_3_79
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MIKATKEILN SYNELFERRK QEILNTKDSL KITGTAYYVS NSGDDNNDGK SENTPWKSFS 60 RVSNADLKSG DGVFFKRGDI FRGSLNAKSG VSYGAYGEGE KPKFYAADKP LNDKDLWELY 120 DKEHNIWKLK EKTLDMGTIV FNGGEAHSRK LIPTFKNMKY VCRDNENKDF DIRTEMTEDL 180 DIFWYYDGNL TTAESKGENF PIPSFNWDDP EISLGDLYLR CDRGNPGEVF QEVEGLARRH 240 SIVCGSERDV TVDNICFKYI GMHGIAANVH VINLTVTNCE FGWIGGCIQT FMGTDPNYPQ 300 GGRGTVTRFG NAIEIYGGCD GYKVHNNYIY EVYDAGITHQ VTTRKKLMME NIEYSHNLIE 360 KCVYGIEYFL DQVEGERESC MKNVVMHHNF IRLSGYGWGQ QRHNTDTPAL IKGWSYVNTA 420 KNHRVEDNIF DRSAYRMLHL VALKDEYCPE MKNNTYIQNI GGTLGQYGGN EVEEPEILKF 480 DQNAEESIKN IFGDKLAKIY YIEE 504
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UKA67782.1 | GH136 | 18 | 497 | 10 | 427 | 0.7671 |
0.8573 |
| AF-A0A1B1MNV8-F1-model_v4 | GH141 | 28 | 503 | 31 | 633 | 0.5878 |
0.7114 |
| UUN30705.1 | GH141 | 31 | 500 | 45 | 615 | 0.5862 |
0.7078 |
| AF-A0A517MZS5-F1-model_v4 | GH141 | 28 | 503 | 33 | 593 | 0.5749 |
0.6909 |
| AF-A0A172TRU5-F1-model_v4 | GH141 | 28 | 503 | 26 | 610 | 0.566 |
0.6807 |
| AF-A0A1B1Y9K1-F1-model_v4 | GH141 | 32 | 503 | 18 | 605 | 0.5626 |
0.7137 |
| QDW26912.1 | GH0 | 33 | 504 | 2 | 434 | 0.5555 |
0.8615 |
| AF-K9XFX2-F1-model_v4 | PL0 | 20 | 502 | 32 | 523 | 0.5504 |
0.618 |
| AF-A0A6B8LKQ3-F1-model_v4 | GH120 | 33 | 503 | 1 | 594 | 0.5481 |
0.6761 |
| AF-A0A6G6X7S9-F1-model_v4 | GH136 | 32 | 504 | 34 | 422 | 0.5447 |
0.7273 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UKA67782.1 | GH136 | 18 | 497 | 10 | 427 | 0.7671 |
0.8573 |
| UUN30705.1 | GH141 | 31 | 500 | 45 | 615 | 0.5862 |
0.7078 |
| A0A517MZS5 | GH141 | 28 | 503 | 33 | 593 | 0.5749 |
0.6909 |
| A0A1R3T4I8 | GH141 | 31 | 504 | 16 | 635 | 0.5566 |
0.6807 |
| WDD95694.1 | GH141 | 31 | 492 | 19 | 634 | 0.555 |
0.6827 |
| QWX84993.1 | GH120 | 32 | 503 | 18 | 567 | 0.552 |
0.6683 |
| D3FDA6 | GH141 | 33 | 504 | 45 | 691 | 0.5493 |
0.7174 |
| A0A6G6X7S9 | GH136 | 32 | 504 | 34 | 422 | 0.5447 |
0.7273 |
| A0A1V4A9D2 | CBM47 , GH141 | 32 | 504 | 31 | 724 | 0.5407 |
0.6926 |
| A0A7H8JT06 | CBM47 , GH141 | 31 | 504 | 51 | 759 | 0.5364 |
0.6976 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3vsv-assembly1.cif.gz_B | 35 | 503 | 1 | 557 | 0.5555 |
0.6711 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.