PROTEIN: HRGMv2_2898_3_78
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Protein File & Metadata
Source:
HRGMv2_2898_3_78.pdb
Genome ID:
Protein ID:
HRGMv2_2898_3_78
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Protein Sequence
MKKRSIVNLT HFVRGVNQAH PQLEYMLRPV KEHLRLMKEY NLSLTVLLQY DALIDSNFTD 60 LLKENQEERL EIGLWLEIPR ILAEKSNVKW NGQDEWTWDW HTYSSYLIGY TPKERMAMVD 120 EAMETFKKIF GCYPDSVGCW IIDAKTLKYL KEKYNVKAAC ICRDQWGTDG MSLWGGYDSI 180 YYPSENNMFC PGDEENQINL PVIRMLVNDP MYNFDIDYTR SRLPELEGAE FFTLEPVFPH 240 CGGNEEWVKW IFSVQSNSAT APYSYAQIGQ ENGFGWEKMG KGLEMQCKYL KTLIDEGLFE 300 SVNVRDTGKW FSENFDVTPA NTVAALTDHK HKGRQSVWYY SKNYRANVFS ENGKLWFRDL 360 RKFCSEVEEL YLTETCKQHG CRYTNPPVLD GLLFSDANVR AGIYPVKKTE NGYEDIIVNA 420 PNFEKFGNVL KFGFDGFAVD CTEDMVCMEL PENGAWELRF SKNAKIKVEI DGDTLRVTSD 480 GTSSEQMEDI NESWAESVSN TMTATVKLLK GKAEMGENKI LLLPQDGKIQ MDFK 534
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GXC6-F1-model_v4 | 2 | 315 | 1 | 320 | 0.6269 |
0.8063 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A222F9B5-F1-model_v4 | CE4 | 1 | 534 | 17 | 471 | 0.4775 |
0.5344 |
| AF-A0A345R6P7-F1-model_v4 | CE4 | 1 | 534 | 19 | 472 | 0.4771 |
0.5359 |
| BCQ47528.1 | GT9 | 2 | 428 | 1 | 467 | 0.4391 |
0.6112 |
| A0A8J2V271 | GT4 | 1 | 316 | 406 | 726 | 0.4136 |
0.7782 |
| AF-Q2RPQ9-F1-model_v4 | GT4 | 1 | 424 | 430 | 764 | 0.4084 |
0.7436 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BCQ47528.1 | GT9 | 2 | 428 | 1 | 467 | 0.4391 |
0.6112 |
| A0A8J2V271 | GT4 | 1 | 316 | 406 | 726 | 0.4136 |
0.7782 |
| QTI78705.1 | GT4 | 1 | 316 | 412 | 735 | 0.4105 |
0.778 |
| Q2RPQ9 | GT4 | 1 | 424 | 430 | 764 | 0.4084 |
0.7436 |
| E0TGL8 | GT4 | 1 | 318 | 398 | 712 | 0.4049 |
0.7679 |
| WDI32003.1 | GT4 | 1 | 316 | 442 | 758 | 0.3967 |
0.7593 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3lm3-assembly1.cif.gz_A | 1 | 531 | 5 | 434 | 0.7145 |
0.8058 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.