PROTEIN: HRGMv2_2896_5_33
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2896_5_33.pdb
Genome ID:
Protein ID:
HRGMv2_2896_5_33
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MSKYKRRFGD RKEGRLLRSL PAFAKFVPFI MPTRNDACNQ YEESFEVSDV DRRLRKLRVD 60 GYKGIGILHF IIAAYIRGVS MLPGMNRFVV GRRIYARDNI EVVMTVKRSL AIDATETTIK 120 VVFEPTDTIF DVYRKMSEKI DEIKTVEGNN NTEDVAEAMC KAPRFLLRFA LTILRIMDYF 180 GWLPQSLLDA SPFHGSMIIT DLGSLRIGPI YHHIYNFGTL PVFISFGAKR HAYELDRHGN 240 MVDRKYVDCK FVMDERTVDG HYYAQFLQAF RYICQHPEII ETPPSKVVED VF 292
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GTS7-F1-model_v4 | 11 | 288 | 1 | 216 | 0.6913 |
0.8335 |
| AF-X8F6E0-F1-model_v4 | 63 | 283 | 1 | 182 | 0.6547 |
0.8291 |
| AF-X8F6G3-F1-model_v4 | 12 | 281 | 28 | 264 | 0.6083 |
0.7526 |
| AF-X8F7X7-F1-model_v4 | 14 | 281 | 1 | 223 | 0.6082 |
0.7296 |
| AF-O45279-F1-model_v4 | 32 | 292 | 118 | 333 | 0.5961 |
0.8615 |
| AF-Q8DPQ9-F1-model_v4 | 32 | 282 | 165 | 375 | 0.5489 |
0.8472 |
| AF-Q383B2-F1-model_v4 | 32 | 286 | 172 | 383 | 0.5455 |
0.8444 |
| AF-A4I3X3-F1-model_v4 | 32 | 286 | 178 | 389 | 0.5418 |
0.8441 |
| AF-A0A0N4U4U7-F1-model_v4 | 32 | 286 | 184 | 394 | 0.5397 |
0.8491 |
| AF-Q4CNP4-F1-model_v4 | 32 | 286 | 181 | 392 | 0.5392 |
0.8423 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8WF83 | GH47 | 32 | 288 | 213 | 433 | 0.4001 |
0.8317 |
| A0A7R9BUJ4 | GT2 | 1 | 272 | 1298 | 1654 | 0.3384 |
0.6609 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8WF83 | GH47 | 32 | 288 | 213 | 433 | 0.4001 |
0.8317 |
| A0A1H1TJ86 | GT28 | 11 | 281 | 609 | 839 | 0.379 |
0.6954 |
| A0A7R9BUJ4 | GT2 | 1 | 272 | 1298 | 1654 | 0.3384 |
0.6609 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7bgj-assembly1.cif.gz_A | 36 | 282 | 1 | 208 | 0.7048 |
0.8417 |
| 3u9b-assembly2.cif.gz_D | 11 | 280 | 1 | 213 | 0.7004 |
0.8287 |
| 3u9f-assembly2.cif.gz_E | 13 | 281 | 1 | 207 | 0.6968 |
0.8338 |
| 4cla-assembly1.cif.gz_A | 6 | 281 | 1 | 213 | 0.6937 |
0.8227 |
| 3cla-assembly1.cif.gz_A | 6 | 281 | 1 | 213 | 0.6932 |
0.8222 |
| 2cla-assembly1.cif.gz_A | 6 | 281 | 1 | 213 | 0.6931 |
0.8223 |
| 1cia-assembly1.cif.gz_A | 6 | 281 | 1 | 213 | 0.6928 |
0.8219 |
| 7uom-assembly1.cif.gz_04 | 32 | 284 | 20 | 226 | 0.6925 |
0.8649 |
| 1cla-assembly1.cif.gz_A | 6 | 281 | 1 | 213 | 0.6925 |
0.8214 |
| 6ct0-assembly1.cif.gz_0 | 32 | 284 | 23 | 229 | 0.6923 |
0.8699 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P62579-F1-model_v4 | 1 | 282 | 1 | 219 | 0.7073 |
0.8269 |
| AF-P62578-F1-model_v4 | 1 | 282 | 1 | 219 | 0.7058 |
0.8252 |
| AF-Q03058-F1-model_v4 | 12 | 281 | 1 | 215 | 0.7054 |
0.8322 |
| AF-P25309-F1-model_v4 | 12 | 281 | 1 | 215 | 0.7045 |
0.831 |
| AF-P06135-F1-model_v4 | 12 | 281 | 1 | 215 | 0.7044 |
0.8311 |
| AF-P62577-F1-model_v4 | 1 | 282 | 1 | 219 | 0.7039 |
0.823 |
| AF-P00486-F1-model_v4 | 12 | 281 | 1 | 215 | 0.7035 |
0.8299 |
| AF-P36882-F1-model_v4 | 12 | 281 | 1 | 215 | 0.7028 |
0.8287 |
| AF-P62580-F1-model_v4 | 12 | 282 | 6 | 219 | 0.7003 |
0.836 |
| AF-P58777-F1-model_v4 | 11 | 282 | 5 | 219 | 0.6986 |
0.8307 |