PROTEIN: HRGMv2_2880_46_3
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Protein File & Metadata
Source:
HRGMv2_2880_46_3.pdb
Genome ID:
Protein ID:
HRGMv2_2880_46_3
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Protein Sequence
MNHFHKLSLW LRRRRRTCFA AAGIAGLLVL TAFTFVHSRS VPFKPLPTEP EPALQWVFVT 60 PNGEGSPSYQ ALFPTQEECA QLAGMPVELT FCTMEKFLNM NAAGLPVDLV TCWYTDSSFK 120 RLETGGEFWP LQDLLDQQVP GFSLPKDFVL WCGNLLGKVY AYPHTDTVLS PEEPKQADTV 180 LIARRDLLEK FHWERRDFEK KESVLEQLKT IRKTSPELTP CYLELSSLQQ MFGASPVSGG 240 EWEDPFFHPA TLEALEYMNT LYRERLLSPD VFTLSEDTLL SQLEEGELFL ASSSGLGRLL 300 AQLPENHPIL KQYEAISPIR SDSGREPAFA NNFDEQYPST LFLKDSPHPQ AQARLLAGFY 360 LQNMELSLQQ EEALRAAGLE TLLDQQPKPQ PASPEDPYVV PITHYEILFS HYSNTRLAAV 420 AERKTAYCQT QVVRLVEDCS PEEVEPEYNQ IVQALQSGEY RLLLDWKQTR YQKALDLLEE 480 PQLEFQPPEG EALSEGF 497
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F7X1-F1-model_v4 | 53 | 461 | 30 | 409 | 0.5434 |
0.6534 |
| AF-A0A133D019-F1-model_v4 | 49 | 476 | 35 | 485 | 0.5372 |
0.6246 |
| AF-A0A133CZN8-F1-model_v4 | 51 | 477 | 38 | 502 | 0.5317 |
0.6305 |
| AF-Q8DNU2-F1-model_v4 | 51 | 466 | 39 | 445 | 0.5265 |
0.6195 |
| AF-Q8DNH8-F1-model_v4 | 49 | 465 | 31 | 419 | 0.5198 |
0.6209 |
| AF-Q8DRJ6-F1-model_v4 | 48 | 479 | 59 | 514 | 0.5166 |
0.6122 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 51 | 477 | 46 | 506 | 0.5768 |
0.6845 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 51 | 468 | 29 | 741 | 0.4288 |
0.6028 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 51 | 477 | 46 | 506 | 0.5768 |
0.6845 |
| A0A7U1BNH7 | GH10 | 51 | 468 | 29 | 741 | 0.4288 |
0.6028 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5g62-assembly2.cif.gz_B | 51 | 479 | 1 | 491 | 0.6138 |
0.7165 |
| 5xs8-assembly1.cif.gz_A | 51 | 471 | 1 | 474 | 0.5983 |
0.7016 |
| 4tqu-assembly1.cif.gz_Q | 49 | 479 | 8 | 492 | 0.5941 |
0.6925 |
| 3vlw-assembly2.cif.gz_B | 50 | 476 | 8 | 489 | 0.5936 |
0.696 |
| 5h6u-assembly1.cif.gz_A | 49 | 476 | 5 | 487 | 0.5935 |
0.6927 |
| 6jhx-assembly2.cif.gz_B | 49 | 473 | 8 | 483 | 0.5916 |
0.6928 |
| 4qse-assembly2.cif.gz_B | 52 | 463 | 1 | 382 | 0.5874 |
0.6813 |
| 3jzj-assembly1.cif.gz_A | 51 | 465 | 2 | 388 | 0.5833 |
0.674 |
| 6jbe-assembly1.cif.gz_A | 51 | 466 | 1 | 404 | 0.5831 |
0.6609 |
| 6jaq-assembly1.cif.gz_A | 51 | 466 | 1 | 403 | 0.5826 |
0.6612 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 51 | 482 | 48 | 538 | 0.566 |
0.6831 |
| AF-P37966-F1-model_v4 | 51 | 476 | 35 | 502 | 0.5603 |
0.6658 |
| AF-Q8FVS7-F1-model_v4 | 51 | 463 | 25 | 411 | 0.554 |
0.657 |
| AF-Q2YKZ9-F1-model_v4 | 51 | 463 | 25 | 411 | 0.5531 |
0.6552 |
| AF-Q578M8-F1-model_v4 | 51 | 463 | 25 | 411 | 0.553 |
0.6551 |
| AF-O58969-F1-model_v4 | 49 | 475 | 38 | 441 | 0.552 |
0.6501 |
| AF-Q9KEE7-F1-model_v4 | 36 | 462 | 4 | 445 | 0.545 |
0.6135 |
| AF-P29822-F1-model_v4 | 52 | 462 | 28 | 422 | 0.5321 |
0.6267 |
| AF-A0A0H2UMY0-F1-model_v4 | 46 | 479 | 34 | 491 | 0.5292 |
0.6136 |
| AF-P94528-F1-model_v4 | 48 | 459 | 27 | 433 | 0.5273 |
0.6125 |