PROTEIN: HRGMv2_2880_2_42
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Protein File & Metadata
Source:
HRGMv2_2880_2_42.pdb
Genome ID:
Protein ID:
HRGMv2_2880_2_42
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Protein Sequence
MDERSALYRS LAGDPIARRV DGLPGSSPWE QAACWALAPA VGAFSQWVLG RALQDGVRRL 60 YFLSRDGWHF YHMAQRLCRA WGLPVECRYL YGSRYAWRLP LYHTDHQRAL SQLESGRTPP 120 TAEGVLRQAG LSPEERAGVL GELAVSGKSI LSPGERRALF QKLKACPRFL FLMDRNSRQA 180 LPGLAGYLRQ EGLLEGVPWA LVDSGWMGSI QETLAQALAL LGAAQGPRGY YWGLYRAPQL 240 GRWACYSFSP GRELKRQAGF CPGFFEAALA APQGMALGYE ERRGRFIPRL GPPPQGGTLS 300 QELEELFADY GEKLLQEGAP RNLLGRAVAE LPRVCSLLEQ LMAWPTRQEA SAFGALPFWD 360 SPLEGAAGPL ASPPGGKSPW PEGSAALYGK CPKQELAALR ARRWARVFKL AWKA 414
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 9 | 397 | 204 | 631 | 0.6612 |
0.8531 |
| AF-Q0P8I2-F1-model_v4 | 1 | 405 | 71 | 975 | 0.4861 |
0.7109 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 399 | 186 | 1075 | 0.5824 |
0.8793 |
| AF-W0DNV7-F1-model_v4 | GT2 | 9 | 413 | 630 | 1091 | 0.5821 |
0.8645 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 8 | 412 | 616 | 1067 | 0.5815 |
0.8588 |
| A0A1I7GMF6 | GT2 | 6 | 408 | 288 | 1083 | 0.5793 |
0.8631 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 24 | 405 | 8 | 403 | 0.5672 |
0.762 |
| A0A9J7AXY3 | GT2 | 24 | 411 | 6 | 399 | 0.5609 |
0.7769 |
| V4JBH5 | GT2 | 24 | 406 | 2 | 396 | 0.56 |
0.7939 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 22 | 405 | 7 | 405 | 0.5587 |
0.801 |
| QRK05458.1 | GT4 | 10 | 412 | 250 | 985 | 0.5538 |
0.8449 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 405 | 558 | 969 | 0.5519 |
0.8078 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 399 | 186 | 1075 | 0.5824 |
0.8793 |
| A0A2I6S8V6 | GT2 | 8 | 412 | 616 | 1067 | 0.5815 |
0.8588 |
| A0A1I7GMF6 | GT2 | 6 | 408 | 288 | 1083 | 0.5793 |
0.8631 |
| A0A0U5F758 | GT2 | 24 | 405 | 8 | 403 | 0.5672 |
0.762 |
| A0A9J7AXY3 | GT2 | 24 | 411 | 6 | 399 | 0.5609 |
0.7769 |
| V4JBH5 | GT2 | 24 | 406 | 2 | 396 | 0.56 |
0.7939 |
| A0A0H3KC95 | GT2 | 22 | 405 | 7 | 405 | 0.5587 |
0.801 |
| QRK05458.1 | GT4 | 10 | 412 | 250 | 985 | 0.5538 |
0.8449 |
| U5MZQ8 | GT2 | 1 | 403 | 558 | 966 | 0.5494 |
0.8083 |
| WAJ24550.1 | GT2 | 1 | 396 | 556 | 963 | 0.5473 |
0.8156 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 11 | 356 | 241 | 591 | 0.6099 |
0.8561 |
| 8a0m-assembly1.cif.gz_B | 4 | 398 | 460 | 876 | 0.5516 |
0.8097 |
| 8a0m-assembly2.cif.gz_C | 1 | 398 | 590 | 1025 | 0.5496 |
0.8335 |
| 8a0m-assembly1.cif.gz_A | 1 | 399 | 589 | 1024 | 0.5494 |
0.8312 |
| 8a0c-assembly1.cif.gz_A | 1 | 401 | 594 | 1028 | 0.5493 |
0.8287 |
| 8a0c-assembly1.cif.gz_B | 1 | 398 | 594 | 1026 | 0.5439 |
0.8256 |
| 8a0m-assembly2.cif.gz_D | 4 | 401 | 489 | 887 | 0.5206 |
0.761 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.