PROTEIN: HRGMv2_2880_22_4
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Protein File & Metadata
Source:
HRGMv2_2880_22_4.pdb
Genome ID:
Protein ID:
HRGMv2_2880_22_4
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Protein Sequence
MNLIPNAPGL SPNYWCTWST QNFGREDEHP DYHNYLGGVG SQFARAEMNE KNLRRWLQQF 60 PKIRGDLYLM LDDGWDVPYG VHPDKSRDRF GTLELDEERF PSFTGTPAQR LKKLNDFVKE 120 SGWRGLGLWV PAQAAGPIEK GPAMEAYWTE RLLWCKEAGV EYWKVDWGTY AHDVEYRLFL 180 TQLASKLYPQ LIVEHAYCMI AYNGSQLPTQ DYAGDRFAEM GEIPQKSLEI HQFSQVFRTY 240 DVFNQMGSST TLDRTAYLLA GQGGLLTCED HVRISASLGC TAGIMRSPYW NEIEGLDYDS 300 TLLRRRLDEV TAGVLWQRLA PAFADGQVLC SAETLTDRWL FKTGECWVDQ VFGQEIHQTA 360 PAVIARGLPL PQVEAEGERP FVTCAQNPNG ALSVTAHRRL LPTRQEVLPP CSVTLSPPSL 420 PPYMGVFGSF QQVALRLPVQ PGETFRVLGQ SLLSEEAVDV TRSVGWKEDG TLLIPGSLIE 480 TLYRPTATPG DLSDPSVVFA LVKEETL 507
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8RX86-F1-model_v4 | 9 | 506 | 38 | 396 | 0.5812 |
0.7267 |
| AF-I1L6Y9-F1-model_v4 | 9 | 504 | 52 | 410 | 0.5724 |
0.7276 |
| AF-K7MJ32-F1-model_v4 | 8 | 503 | 58 | 418 | 0.5699 |
0.7264 |
| AF-Q9FXT4-F1-model_v4 | 9 | 503 | 62 | 417 | 0.5697 |
0.7351 |
| AF-I1L3R4-F1-model_v4 | 8 | 503 | 69 | 426 | 0.5607 |
0.7266 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7M1TAB8-F1-model_v4 | GH27 | 13 | 507 | 1 | 439 | 0.6037 |
0.6628 |
| AF-A0A1G5E1I1-F1-model_v4 | GH27 | 8 | 501 | 6 | 436 | 0.6004 |
0.6673 |
| AF-D5UJJ0-F1-model_v4 | GH27 | 8 | 503 | 4 | 440 | 0.5994 |
0.6626 |
| AF-D7CBV6-F1-model_v4 | GH27 | 13 | 507 | 1 | 419 | 0.5983 |
0.6721 |
| AF-A0A4P8XKS8-F1-model_v4 | GH27 | 8 | 501 | 8 | 423 | 0.5941 |
0.6719 |
| AF-A0A3Q9C7X0-F1-model_v4 | GH27 | 13 | 501 | 1 | 412 | 0.594 |
0.6699 |
| AF-A0A7R7IDL6-F1-model_v4 | GH27 | 8 | 501 | 7 | 428 | 0.5913 |
0.6639 |
| AF-A0A2R2WCZ4-F1-model_v4 | GH27 | 9 | 503 | 7 | 408 | 0.5874 |
0.6737 |
| AF-A0A161ICV0-F1-model_v4 | GH27 | 8 | 506 | 6 | 440 | 0.5864 |
0.6517 |
| AF-A0A291GTT8-F1-model_v4 | GH27 | 8 | 501 | 6 | 437 | 0.5861 |
0.6524 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Y1CIG9 | GH27 | 8 | 503 | 29 | 400 | 0.5901 |
0.7174 |
| A0A2Z5G4X4 | GH27 | 8 | 504 | 23 | 396 | 0.5851 |
0.7051 |
| F6FX85 | GH27 | 8 | 506 | 10 | 452 | 0.5841 |
0.6471 |
| A0A514BWX3 | GH27 | 9 | 501 | 8 | 415 | 0.5834 |
0.6655 |
| A0A077W7F8 | GH27 | 9 | 503 | 32 | 465 | 0.5767 |
0.6557 |
| F0HA27 | GH27 | 8 | 503 | 34 | 409 | 0.57 |
0.6938 |
| I3ZFP9 | GH27 | 8 | 506 | 37 | 465 | 0.5692 |
0.6544 |
| A0A6B3TQD4 | GH13 | 1 | 505 | 17 | 434 | 0.569 |
0.6723 |
| A0A9J7BJ60 | GH27 | 8 | 501 | 39 | 468 | 0.5657 |
0.6509 |
| A0A3G8JVI5 | GH27 | 8 | 501 | 48 | 426 | 0.5632 |
0.6946 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1uas-assembly1.cif.gz_A | 9 | 503 | 7 | 362 | 0.6109 |
0.7369 |
| 6f4c-assembly1.cif.gz_B | 8 | 503 | 6 | 363 | 0.6087 |
0.7318 |
| 4nx0-assembly1.cif.gz_D | 8 | 507 | 9 | 435 | 0.5941 |
0.6654 |
| 4nzf-assembly1.cif.gz_A | 8 | 504 | 9 | 431 | 0.5895 |
0.663 |
| 4nzj-assembly1.cif.gz_A | 1 | 503 | 9 | 468 | 0.5455 |
0.5914 |
| 4ogz-assembly2.cif.gz_B | 1 | 501 | 10 | 466 | 0.5417 |
0.5901 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.