PROTEIN: HRGMv2_2820_6_185
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Protein File & Metadata
Source:
HRGMv2_2820_6_185.pdb
Genome ID:
Protein ID:
HRGMv2_2820_6_185
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Protein Sequence
MKLHPLIKNK VLKPPAFAVW AKPSVKHMSD GRIKKLCTDK SVLWEIGREP GACSDHMEMS 60 GFRSDSILCV GKSASGKLLV HRHITIPALR TLPNDTRGSF CFNVSGSVCK IKANGKRQAE 120 LPQKIWMRGN LTVVSDSSET EITRTFINCA DAPALIEKVE VRMKRHGLLD ISAPYSKSVY 180 PAEYCVGGEI EYGVCACPGG SVSFTRAYDF KRKKDMHAGE TCTFYLVYFA GKGKTVINTQ 240 AQIQQRNQLI GDLFSSMALQ SGNAFLDAEF SHCLLRGSES IYKTKAGLFH SPGGGNYYAA 300 LWTNDQCEYT NPFFAFSGYA PGIESALNCY RLYETYMDKS DTPFASKRAL VTSIVAEGED 360 FWNGAGDRGD GAMYAYGICR FLLGLGNKAL MEEFFESIEW CIDFCLSRKN EQGVICSDSD 420 ELENRFESGN ANLNTSCLTY DALLNGALIC GILNKTKTAQ TWKEEAGRLK ESIENYFGAN 480 VEGFDTYAYY KGNDLLRSWI CTPLTVEIFS RKEETLKALF SPKLYKNGML RSISNNPTTW 540 DRSLLFALRG AFLANDPDAF FKVCSYSESR LTGNHSPYPF EAFPEGNRAH LSGESILFCR 600 IITEGLFGLR VTGWKKLRIS LKKRNISLSG LKLFGETFSI SENGNGIVIA TETEMYQTDQ 660 LEAVFDFEKR NFI 673
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175W6Z5-F1-model_v4 | 31 | 672 | 5 | 785 | 0.7062 |
0.8071 |
| AF-U7PID1-F1-model_v4 | 32 | 672 | 7 | 814 | 0.7001 |
0.8131 |
| AF-Q59005-F1-model_v4 | 46 | 613 | 1 | 615 | 0.6984 |
0.7976 |
| AF-A0A132ZDE7-F1-model_v4 | 39 | 673 | 1 | 722 | 0.6933 |
0.774 |
| AF-A0A133CSL2-F1-model_v4 | 36 | 673 | 9 | 695 | 0.692 |
0.7574 |
| AF-A0A0D2EUZ7-F1-model_v4 | 18 | 673 | 8 | 674 | 0.6775 |
0.7076 |
| AF-Q10211-F1-model_v4 | 15 | 661 | 11 | 649 | 0.6766 |
0.7111 |
| AF-K0EKF5-F1-model_v4 | 28 | 645 | 16 | 649 | 0.6694 |
0.7317 |
| AF-A0A0D2GPD4-F1-model_v4 | 36 | 628 | 1 | 663 | 0.668 |
0.7615 |
| AF-Q8DN23-F1-model_v4 | 40 | 672 | 1 | 760 | 0.6623 |
0.7593 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1B2Z0H3-F1-model_v4 | CBM0 | 26 | 670 | 24 | 877 | 0.7966 |
0.9431 |
| AF-A0A0K2SMW4-F1-model_v4 | GH0 | 31 | 646 | 1 | 651 | 0.7347 |
0.8083 |
| AF-A0A089LI24-F1-model_v4 | GH94 | 30 | 672 | 1 | 764 | 0.7249 |
0.8166 |
| QYY36758.1 | GH94 | 30 | 672 | 3 | 751 | 0.7247 |
0.811 |
| AF-A0A482D4L9-F1-model_v4 | GH94 | 30 | 673 | 4 | 784 | 0.7239 |
0.8234 |
| AF-A0A089KG41-F1-model_v4 | GH94 | 31 | 672 | 5 | 765 | 0.7228 |
0.8169 |
| AF-A0A2R4WYB3-F1-model_v4 | GH94 | 31 | 673 | 1 | 781 | 0.7223 |
0.8212 |
| A0A9Q4B6D3 | GH15 | 17 | 618 | 3 | 623 | 0.7222 |
0.7869 |
| AF-E4Q7Z6-F1-model_v4 | GH94 | 31 | 673 | 1 | 786 | 0.7214 |
0.8229 |
| AF-A4XIG8-F1-model_v4 | GH94 | 31 | 673 | 1 | 786 | 0.7213 |
0.8228 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WFB35204.1 | GH94 | 29 | 670 | 1 | 754 | 0.7358 |
0.8228 |
| A0A1Q2MCY1 | GH94 | 30 | 672 | 3 | 758 | 0.7288 |
0.8181 |
| C9RC19 | GH15 | 30 | 664 | 1 | 606 | 0.7273 |
0.7788 |
| WFB34355.1 | GH94 | 33 | 672 | 6 | 768 | 0.7262 |
0.824 |
| A0A089LI24 | GH94 | 30 | 672 | 1 | 764 | 0.7249 |
0.8166 |
| QYY36758.1 | GH94 | 30 | 672 | 3 | 751 | 0.7247 |
0.811 |
| F9VLH0 | GH94 | 30 | 673 | 3 | 778 | 0.7242 |
0.8214 |
| A0A089KG41 | GH94 | 31 | 672 | 5 | 765 | 0.7228 |
0.8169 |
| A0A9Q4B6D3 | GH15 | 17 | 618 | 3 | 623 | 0.7222 |
0.7869 |
| D9TIB5 | GH94 | 31 | 673 | 1 | 786 | 0.7208 |
0.8224 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1v7v-assembly1.cif.gz_A | 31 | 673 | 1 | 776 | 0.7193 |
0.816 |
| 7fe3-assembly1.cif.gz_A | 35 | 644 | 1 | 659 | 0.715 |
0.7931 |
| 8bou-assembly1.cif.gz_A | 29 | 672 | 2 | 802 | 0.7102 |
0.8162 |
| 3s4b-assembly1.cif.gz_A | 31 | 673 | 1 | 820 | 0.7077 |
0.8208 |
| 4zlf-assembly1.cif.gz_A | 33 | 672 | 1 | 781 | 0.7064 |
0.8071 |
| 8ho8-assembly1.cif.gz_B | 32 | 673 | 1 | 807 | 0.7057 |
0.8147 |
| 8ho9-assembly1.cif.gz_A | 31 | 673 | 1 | 808 | 0.705 |
0.8135 |
| 3acs-assembly1.cif.gz_B | 31 | 673 | 1 | 820 | 0.705 |
0.8178 |
| 3qde-assembly1.cif.gz_B | 31 | 673 | 1 | 808 | 0.7049 |
0.8133 |
| 3act-assembly1.cif.gz_A | 31 | 673 | 1 | 820 | 0.7048 |
0.8176 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9F8X1-F1-model_v4 | 31 | 673 | 1 | 797 | 0.7145 |
0.819 |
| AF-Q76IQ9-F1-model_v4 | 31 | 673 | 1 | 799 | 0.7136 |
0.8185 |
| AF-Q7S0S2-F1-model_v4 | 32 | 672 | 7 | 786 | 0.708 |
0.8104 |
| AF-B9K7M6-F1-model_v4 | 31 | 673 | 1 | 811 | 0.708 |
0.8176 |
| AF-Q8P3J4-F1-model_v4 | 30 | 672 | 11 | 792 | 0.7059 |
0.8085 |
| AF-D6XZ22-F1-model_v4 | 30 | 673 | 4 | 759 | 0.702 |
0.7886 |
| AF-Q59005-F1-model_v4 | 46 | 613 | 1 | 615 | 0.6984 |
0.7976 |
| AF-Q4J9D4-F1-model_v4 | 21 | 623 | 1 | 576 | 0.6947 |
0.7582 |
| AF-Q4J7W0-F1-model_v4 | 20 | 610 | 1 | 558 | 0.6826 |
0.7564 |
| AF-E6ENP7-F1-model_v4 | 26 | 672 | 19 | 773 | 0.6814 |
0.773 |