PROTEIN: HRGMv2_2816_3_121
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Protein File & Metadata
Source:
HRGMv2_2816_3_121.pdb
Genome ID:
Protein ID:
HRGMv2_2816_3_121
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Protein Sequence
MKIKQIITVC LLAAFLAGFG LWSVLRTPDA VSQAERRPLA QRPAFTAAGF LSGKFSDALD 60 DFAADQFPLR EQLRTLRSLV SYDVMGQRDV NGVYLSQGYA AKLDFPLNTA SVERAADRFR 120 YVYDTYLSGT DTKVYLSVIP DKGYFMAPSS GRPSMDYDAL VSQLRESTPY MTYIDLFDLL 180 TIEDYYRTDA HWRQERLEPV ARRIAAAMGT DAGASYREVT LERPFYGVYS GYAALPLAGE 240 SLSYLTNDTI DACRVTNYET GKTGPVYNLD KAAGSDPYEL FLSGSVSLLT VDNPNARTDR 300 ELVIFRDSFG SSLAPLLLEG YSRVTLVDIR YLSPSQLGNF LTFDHQDVWF LYSTSVLNNS 360 STLK 364
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q51393-F1-model_v4 | 2 | 364 | 8 | 367 | 0.6439 |
0.6933 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1U9R721-F1-model_v4 | GT2 | 25 | 364 | 42 | 765 | 0.4467 |
0.6596 |
| AF-A0A386X1Z0-F1-model_v4 | GT0 | 1 | 364 | 41 | 731 | 0.444 |
0.61 |
| AF-A0A2R4XP73-F1-model_v4 | GT0 | 76 | 364 | 133 | 735 | 0.4312 |
0.7288 |
| AF-A0A5K7Y5Q0-F1-model_v4 | GT0 | 60 | 364 | 438 | 711 | 0.4234 |
0.7431 |
| USZ49714.1 | GT0 | 16 | 364 | 109 | 750 | 0.4205 |
0.6053 |
| AF-A0A5P9INU8-F1-model_v4 | GT0 | 90 | 364 | 445 | 714 | 0.4195 |
0.7485 |
| AF-A0A060B8H9-F1-model_v4 | GT0 | 48 | 364 | 254 | 719 | 0.4175 |
0.6449 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1U9R721 | GT2 | 25 | 364 | 42 | 765 | 0.4467 |
0.6596 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4nzk-assembly1.cif.gz_A | 82 | 364 | 4 | 295 | 0.7314 |
0.8651 |
| 5v8d-assembly3.cif.gz_C | 89 | 364 | 1 | 296 | 0.7003 |
0.8454 |
| 5v8d-assembly4.cif.gz_D | 89 | 364 | 1 | 297 | 0.6987 |
0.8448 |
| 5v8d-assembly2.cif.gz_B | 86 | 364 | 1 | 294 | 0.6947 |
0.8278 |
| 5v8e-assembly2.cif.gz_B | 91 | 364 | 2 | 303 | 0.6914 |
0.8488 |
| 5v8d-assembly1.cif.gz_A | 92 | 364 | 1 | 286 | 0.688 |
0.8252 |
| 4o8v-assembly2.cif.gz_B | 90 | 364 | 2 | 265 | 0.6016 |
0.7292 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q887Q7-F1-model_v4 | 1 | 364 | 2 | 358 | 0.6787 |
0.7347 |
| AF-Q88ND3-F1-model_v4 | 1 | 364 | 6 | 358 | 0.661 |
0.7191 |
| AF-O52197-F1-model_v4 | 2 | 364 | 4 | 358 | 0.651 |
0.7075 |
| AF-Q51393-F1-model_v4 | 2 | 364 | 8 | 367 | 0.6439 |
0.6933 |