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PROTEIN: HRGMv2_2809_4_95

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Protein File & Metadata
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Source:
HRGMv2_2809_4_95.pdb
Genome ID:
HRGMv2_2809
Protein ID:
HRGMv2_2809_4_95

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Detailed structural information will appear here after analysis...

Protein Sequence 
MDGIMQMNLK   RMLHLNGIKR   TLNLFLINHV   FVGTKPLACN   MKRKLLRGIG   CPVGDGTTIV 60
GPIECKGTIA   IGNNCWIGKN   CKVNGNGTVQ   IGDNCDLGPE   VTFQTGGHAI   GDRTRRAGEG 120
EIYHQVIGNG   TWIGGRSTIC   NNSSVGNGCV   VAACACVVHD   VPDNTLVGGV   PAKVIRSLEV 180
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P0ACD2-F1-model_v4 12 180 16 180 0.8213 0.9176
AF-H9L4A1-F1-model_v4 12 180 16 180 0.8178 0.9181
AF-Q5F514-F1-model_v4 12 180 1 170 0.8086 0.866
AF-Q54ED9-F1-model_v4 13 180 15 179 0.8016 0.8961
AF-K0EU34-F1-model_v4 10 178 12 178 0.7972 0.8747
AF-Q32J39-F1-model_v4 1 178 1 183 0.7818 0.8191
AF-P77791-F1-model_v4 1 178 1 183 0.7805 0.8181
AF-A0A0H3GKK7-F1-model_v4 10 180 18 185 0.7791 0.8725
AF-Q8ZRA8-F1-model_v4 10 178 18 183 0.7786 0.8713
AF-Q552S7-F1-model_v4 1 180 3 187 0.7777 0.8194
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
D8DUW3 GT2 6 180 243 412 0.5829 0.8747
AF-A0A517YPZ3-F1-model_v4 GT2 9 180 320 486 0.5658 0.8988
AF-A0A1Z4N893-F1-model_v4 GT2 12 180 307 471 0.565 0.9162
A0A9W4F949 GT2 12 180 308 472 0.5633 0.9143
AF-A0A518C0G7-F1-model_v4 GT2 9 180 348 514 0.5621 0.9047
A0A7M2X016 GT2 9 180 352 518 0.5569 0.9042
AF-A0A6P1YLS6-F1-model_v4 GT4 12 180 24 188 0.5511 0.9148
AF-A0A517T4M4-F1-model_v4 GT4 1 180 12 620 0.5086 0.8011
AF-A0A0S2M2B5-F1-model_v4 GT4 22 180 379 560 0.4721 0.8134
AF-A0A1S8SH84-F1-model_v4 GT2 35 180 490 670 0.4133 0.8616
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
D8DUW3 GT2 6 180 243 412 0.5829 0.8747
A0A517YPZ3 GT2 9 180 320 486 0.5658 0.8988
A0A9W4F949 GT2 12 180 308 472 0.5633 0.9143
A0A518C0G7 GT2 9 180 348 514 0.5621 0.9047
A0A7M2X016 GT2 9 180 352 518 0.5569 0.9042
A0A6P1YLS6 GT4 12 180 24 188 0.5511 0.9148
A0A517T4M4 GT4 1 180 12 620 0.5086 0.8011
A0A0S2M2B5 GT4 22 180 379 560 0.4721 0.8134
A0A5F1S5D1 GT2 1 180 140 555 0.4297 0.7119
A0A3T1DE15 GT2 15 180 398 726 0.421 0.7676
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3ect-assembly1.cif.gz_A 9 180 10 176 0.8165 0.8898
3nz2-assembly5.cif.gz_I 1 180 1 184 0.8016 0.831
3srt-assembly2.cif.gz_B 10 180 19 187 0.786 0.8736
2p2o-assembly1.cif.gz_A 10 180 17 184 0.7859 0.8725
6ag8-assembly1.cif.gz_C 10 178 17 182 0.7754 0.8663
3igj-assembly1.cif.gz_A 1 180 1 186 0.7752 0.8116
4dcl-assembly1.cif.gz_A 1 180 1 186 0.7654 0.8061
5u2k-assembly1.cif.gz_A 10 180 19 186 0.7621 0.8583
1kqa-assembly1.cif.gz_A 10 180 18 186 0.7616 0.8716
3vbj-assembly1.cif.gz_E 32 180 2 173 0.69 0.8613
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P0ACD3-F1-model_v4 12 180 16 180 0.8216 0.9178
AF-P0ACD2-F1-model_v4 12 180 16 180 0.8213 0.9176
AF-P37515-F1-model_v4 1 178 1 184 0.7868 0.8251
AF-P77791-F1-model_v4 1 178 1 183 0.7805 0.8181
AF-Q552S7-F1-model_v4 1 180 3 187 0.7777 0.8194
AF-Q54UU2-F1-model_v4 1 180 5 188 0.7751 0.8186
AF-P28266-F1-model_v4 1 176 1 183 0.7741 0.82
AF-P08632-F1-model_v4 1 179 1 186 0.7714 0.8188
AF-P40892-F1-model_v4 10 180 18 186 0.7614 0.8638
AF-Q4L967-F1-model_v4 10 180 19 186 0.7591 0.8595
Download Full SwissProt Results