PROTEIN: HRGMv2_2665_1_1357
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Protein File & Metadata
Source:
HRGMv2_2665_1_1357.pdb
Genome ID:
Protein ID:
HRGMv2_2665_1_1357
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Protein Sequence
MAKQVPSYTG TLRNHSLTIP ACVSECSGIR IFGRRIKSLA FSTDVAIIKN INADAIIAVY 60 PFTPQPVISQ AIISVSDVPV FVGVGGGITT GSRSVRLAIQ SEHQGAYGVV LNAPTSDDVI 120 RQIKKVVDIP VVITVVSAHT DIGSRLEAGA DFLNVSGAAA TPEIVAEIRR DFPKVPIIAT 180 GGPTEESILR TIQAGANAIT YTPPSNGVLF ARIMNQHRKA L 221
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CSS6-F1-model_v4 | 1 | 221 | 2 | 223 | 0.966 |
0.9877 |
| AF-K0EM33-F1-model_v4 | 29 | 221 | 5 | 242 | 0.6724 |
0.8413 |
| AF-A0A077ZBS2-F1-model_v4 | 1 | 221 | 401 | 622 | 0.6609 |
0.9833 |
| AF-K0ER22-F1-model_v4 | 29 | 221 | 19 | 271 | 0.6368 |
0.8554 |
| AF-A0A0D2DIS9-F1-model_v4 | 29 | 221 | 14 | 271 | 0.6173 |
0.8306 |
| AF-Q501F7-F1-model_v4 | 29 | 221 | 41 | 300 | 0.5997 |
0.8338 |
| AF-A0A0D2E3F1-F1-model_v4 | 2 | 213 | 1 | 300 | 0.5694 |
0.7291 |
| AF-I1KZI4-F1-model_v4 | 30 | 221 | 48 | 418 | 0.5444 |
0.8503 |
| AF-Q8GYI4-F1-model_v4 | 30 | 221 | 75 | 406 | 0.5412 |
0.8528 |
| AF-Q56062-F1-model_v4 | 16 | 188 | 27 | 243 | 0.5167 |
0.7517 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4mg4-assembly4.cif.gz_D | 30 | 218 | 3 | 246 | 0.6783 |
0.8488 |
| 4mg4-assembly1.cif.gz_H | 30 | 218 | 2 | 243 | 0.6777 |
0.8445 |
| 4mg4-assembly2.cif.gz_F | 30 | 218 | 4 | 250 | 0.6752 |
0.8509 |
| 4mg4-assembly1.cif.gz_A | 30 | 218 | 5 | 250 | 0.6702 |
0.8451 |
| 1ujq-assembly1.cif.gz_D | 29 | 220 | 5 | 251 | 0.6511 |
0.8334 |
| 2dua-assembly1.cif.gz_A | 30 | 221 | 6 | 255 | 0.6443 |
0.843 |
| 4lsb-assembly1.cif.gz_B | 29 | 221 | 9 | 257 | 0.644 |
0.8313 |
| 4lsb-assembly1.cif.gz_A | 29 | 221 | 8 | 258 | 0.6431 |
0.8291 |
| 1zlp-assembly1.cif.gz_B | 29 | 221 | 2 | 258 | 0.6399 |
0.8352 |
| 3eoo-assembly4.cif.gz_L | 29 | 221 | 5 | 261 | 0.637 |
0.8325 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9Z9T7-F1-model_v4 | 29 | 221 | 16 | 267 | 0.6274 |
0.8355 |
| AF-Q8NSH8-F1-model_v4 | 29 | 220 | 15 | 270 | 0.6227 |
0.8372 |
| AF-Q8NSL2-F1-model_v4 | 29 | 221 | 16 | 271 | 0.6168 |
0.8283 |
| AF-Q56062-F1-model_v4 | 16 | 188 | 27 | 243 | 0.5167 |
0.7517 |
| AF-P11435-F1-model_v4 | 16 | 188 | 26 | 241 | 0.5124 |
0.7461 |
| AF-Q84G06-F1-model_v4 | 16 | 187 | 24 | 242 | 0.5094 |
0.7404 |