PROTEIN: HRGMv2_2621_9_11
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Protein File & Metadata
Source:
HRGMv2_2621_9_11.pdb
Genome ID:
Protein ID:
HRGMv2_2621_9_11
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Protein Sequence
MKHTIQQANP DGLGRVFYQA AGTIILSLLA VYAVIWAFTA DTLFGSAVYN SYVLQAQRWL 60 TGHLDLGQDY SYLEIAEFGG RYFISFPPIP SVILLPFTAV FGLETPDHLI AAAIGITGAL 120 YALRLSLRMG QEPHAAVLWT LLLTIGSNFL HIGYRADVWY FAQVCAFTFS MMALYYAACG 180 GVRRAWIPLF CLALAVGCRP LNLVYLPLVV WLLWQTVRRS GGWRACLCRG WWQLLPPLAV 240 GVFLMVLNYA RFGSVFEFGH NYLPEFAEES VHGQFWLGYI PQNLGRMFRL PAVENHRLGF 300 PVFDGVALWL VSPIFLAWLY FGCRGVWQCR RDPASWLCLI LPALHILFLC AHKTLGGWQF 360 GNRYTVDLLP CVFFGLLLWM KAGGRRGFPW PCYALLFWGL GVNLVGTIAV MEHWITG 417
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-X8F0H0-F1-model_v4 | 1 | 417 | 23 | 517 | 0.629 |
0.7137 |
| AF-G5EDN2-F1-model_v4 | 14 | 417 | 1 | 480 | 0.5997 |
0.6858 |
| AF-Q9HUZ2-F1-model_v4 | 17 | 417 | 7 | 388 | 0.5894 |
0.6994 |
| AF-K0EVV4-F1-model_v4 | 5 | 417 | 19 | 516 | 0.5887 |
0.7369 |
| AF-Q9CC27-F1-model_v4 | 5 | 417 | 17 | 388 | 0.571 |
0.72 |
| AF-Q9NX78-F1-model_v4 | 2 | 417 | 7 | 579 | 0.5646 |
0.7187 |
| AF-F1M7C0-F1-model_v4 | 7 | 417 | 11 | 574 | 0.5618 |
0.7216 |
| AF-A0A0H3GZQ8-F1-model_v4 | 15 | 417 | 1 | 434 | 0.561 |
0.6713 |
| AF-P76473-F1-model_v4 | 15 | 417 | 1 | 432 | 0.56 |
0.6702 |
| AF-O52327-F1-model_v4 | 15 | 417 | 1 | 426 | 0.5597 |
0.6684 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1S6H5E4-F1-model_v4 | GT39 | 12 | 417 | 1 | 412 | 0.669 |
0.7077 |
| AF-L7U7I6-F1-model_v4 | GT39 | 1 | 414 | 12 | 404 | 0.6629 |
0.7156 |
| WCO68223.1 | GT39 | 16 | 417 | 1 | 435 | 0.6599 |
0.7177 |
| A0A2P5P5F5 | GT39 | 12 | 414 | 11 | 413 | 0.6447 |
0.6891 |
| AF-A0A0K1NAU4-F1-model_v4 | GT39 | 1 | 417 | 1 | 476 | 0.6404 |
0.7032 |
| AF-A0A3G6J888-F1-model_v4 | GT39 | 1 | 417 | 34 | 552 | 0.6239 |
0.7253 |
| AF-I4BYW5-F1-model_v4 | GT83 | 8 | 417 | 1 | 389 | 0.6158 |
0.729 |
| AF-A0A5B9YAP3-F1-model_v4 | GT39 | 1 | 417 | 1 | 559 | 0.6114 |
0.7131 |
| SDT66553.1 | GT83 | 1 | 417 | 3 | 391 | 0.6091 |
0.7357 |
| A0A2N1J742 | GT22 | 17 | 417 | 1 | 392 | 0.6003 |
0.697 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K9U6Z6 | GT76 | 9 | 417 | 8 | 415 | 0.7238 |
0.7632 |
| A0A1S6H5E4 | GT39 | 12 | 417 | 1 | 412 | 0.669 |
0.7077 |
| A0A8E2H3U6 | GT39 | 1 | 417 | 1 | 420 | 0.6664 |
0.6942 |
| A0A7D6ESH4 | GT39 | 9 | 417 | 4 | 431 | 0.6649 |
0.7119 |
| L7U7I6 | GT39 | 1 | 414 | 12 | 404 | 0.6629 |
0.7156 |
| A0A0B5BD88 | GT39 | 14 | 416 | 1 | 400 | 0.6604 |
0.7226 |
| A0A7G5Z289 | GT39 | 11 | 417 | 6 | 417 | 0.6601 |
0.7001 |
| WCO68223.1 | GT39 | 16 | 417 | 1 | 435 | 0.6599 |
0.7177 |
| G2IJ82 | GT39 | 1 | 417 | 12 | 431 | 0.6593 |
0.695 |
| A0A0G4B0Z3 | GT39 | 13 | 417 | 1 | 433 | 0.6581 |
0.7127 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4GYH0-F1-model_v4 | 10 | 417 | 6 | 373 | 0.6465 |
0.7764 |
| AF-P9WN04-F1-model_v4 | 1 | 417 | 27 | 522 | 0.6338 |
0.7203 |
| AF-P9WN05-F1-model_v4 | 1 | 417 | 27 | 522 | 0.6337 |
0.7213 |
| AF-L8F4Z2-F1-model_v4 | 1 | 417 | 21 | 516 | 0.6328 |
0.7173 |
| AF-O67601-F1-model_v4 | 16 | 417 | 1 | 407 | 0.6098 |
0.6523 |
| AF-Q6BH65-F1-model_v4 | 1 | 417 | 9 | 534 | 0.58 |
0.6732 |
| AF-Q7N3Q9-F1-model_v4 | 11 | 417 | 1 | 436 | 0.5708 |
0.6785 |
| AF-B4ETL9-F1-model_v4 | 12 | 417 | 2 | 436 | 0.5677 |
0.6768 |
| AF-A8GDR9-F1-model_v4 | 12 | 417 | 1 | 436 | 0.5675 |
0.6764 |
| AF-Q1C744-F1-model_v4 | 16 | 417 | 4 | 437 | 0.5672 |
0.6812 |