PROTEIN: HRGMv2_2621_33_19
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2621_33_19.pdb
Genome ID:
Protein ID:
HRGMv2_2621_33_19
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MMKANLSGLL DKMERQYDLN KSMIYENRPE WQPEQGGGYH SRHSGIVHLT RETADFISLV 60 YLLEDHRRMP LAEKSILALL KIQDMDERSK TYGLWSYLLE ENLQQMLTPD FNWANFISNQ 120 LAYVLKKRSH YLSEELKQKL IISLIAAAEC TKRRNVAADY TNISFMSVVT LACAGEMGHM 180 PQLLSGAKIR LKKAYSYNQF SGNFSEFNSP VYTLVAIEEL TRLTFLVDDA DCRRWAGELL 240 FLAWETTLKH YDRRRYQLCP PHSRAYSDFI ANKDLEAMIY VATDGKFGDP GDGMSTFFKL 300 PLKLPAELEH YLFNPQKTCF MQDIFYRKNT IRDIAEEMVI IPDVDCPDLK AYSYISERYS 360 MGTFEKTDLW AQRRTNMVYW GEADVPKAIR LRCIATDSDY CSGMAYSAMY KNGILSTTGF 420 ALDHGAFHYL LDKDKGGIIK TQKLFFCFEI NAKDVKVQQN GNTFKVYDSE TSIFIHIIKA 480 VFDGCDMSCV MNSQQNRIEM ICYDDGREVD FNHIGQCYII FTMSVHEKMQ CLKAEIYENT 540 VHAAAAFGGK LLEISSPAIP RTYLESLKTT KISIK 575
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1S8HMP8-F1-model_v4 | 1 | 572 | 21 | 632 | 0.5811 |
0.6267 |
| AF-Q5RGL8-F1-model_v4 | 1 | 554 | 71 | 728 | 0.4969 |
0.6441 |
| AF-Q9UL01-F1-model_v4 | 1 | 553 | 66 | 726 | 0.4894 |
0.6367 |
| AF-B5DF19-F1-model_v4 | 1 | 553 | 66 | 726 | 0.4891 |
0.6369 |
| AF-Q0VBN2-F1-model_v4 | 1 | 575 | 83 | 1145 | 0.4663 |
0.633 |
| AF-Q8IZU8-F1-model_v4 | 1 | 575 | 88 | 1150 | 0.4648 |
0.6317 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A737I0L0 | PL17_1 | 1 | 555 | 16 | 642 | 0.5924 |
0.6656 |
| D1AWE1 | PL12 | 1 | 575 | 10 | 590 | 0.5923 |
0.6197 |
| AF-A0A1B2DNQ4-F1-model_v4 | PL17_1 | 1 | 573 | 16 | 671 | 0.5912 |
0.6547 |
| AF-Q8CLP5-F1-model_v4 | PL17_1 | 1 | 575 | 5 | 648 | 0.5909 |
0.6476 |
| AF-A0A7S8W8G1-F1-model_v4 | PL17_1 | 1 | 575 | 20 | 661 | 0.5874 |
0.6469 |
| AF-A0A7G8UMI7-F1-model_v4 | PL37 | 1 | 527 | 4 | 596 | 0.5863 |
0.6622 |
| AF-A0A6G9RJR8-F1-model_v4 | PL17_1 | 1 | 575 | 20 | 661 | 0.5862 |
0.6458 |
| AF-A0A7I6T351-F1-model_v4 | PL17_1 | 1 | 575 | 20 | 661 | 0.585 |
0.6446 |
| AF-E3G3T6-F1-model_v4 | PL17_1 | 1 | 552 | 15 | 644 | 0.585 |
0.6584 |
| AF-A0A806X5F4-F1-model_v4 | PL17_1 | 1 | 552 | 15 | 644 | 0.5848 |
0.6581 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6P1M2Q6 | GH154 | 1 | 572 | 21 | 671 | 0.5951 |
0.6596 |
| C6XTA3 | PL37 | 1 | 527 | 29 | 633 | 0.5935 |
0.6873 |
| A0A737I0L0 | PL17_1 | 1 | 555 | 16 | 642 | 0.5924 |
0.6656 |
| D1AWE1 | PL12 | 1 | 575 | 10 | 590 | 0.5923 |
0.6197 |
| F7PHK5 | GH154 | 1 | 575 | 14 | 653 | 0.5914 |
0.643 |
| A0A1B2DNQ4 | PL17_1 | 1 | 573 | 16 | 671 | 0.5912 |
0.6547 |
| S4DS97 | GH154 | 1 | 571 | 21 | 614 | 0.5881 |
0.629 |
| A0A7G8UMI7 | PL37 | 1 | 527 | 4 | 596 | 0.5863 |
0.6622 |
| G9YC51 | PL17_1 | 1 | 575 | 21 | 670 | 0.5839 |
0.6474 |
| A0A8J8SCT1 | PL12 | 1 | 575 | 28 | 647 | 0.5829 |
0.6363 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4fnv-assembly1.cif.gz_A | 2 | 575 | 54 | 659 | 0.5658 |
0.6202 |
| 6ljl-assembly1.cif.gz_A | 1 | 574 | 163 | 840 | 0.5485 |
0.661 |
| 6hzn-assembly1.cif.gz_A | 1 | 554 | 46 | 702 | 0.54 |
0.6395 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q89YR9-F1-model_v4 | 2 | 573 | 97 | 702 | 0.558 |
0.629 |
| AF-T2KMH5-F1-model_v4 | 1 | 527 | 40 | 635 | 0.557 |
0.6465 |
| AF-P0C2H4-F1-model_v4 | 1 | 553 | 66 | 726 | 0.4903 |
0.6383 |
| AF-Q8BLI4-F1-model_v4 | 1 | 553 | 66 | 726 | 0.4902 |
0.638 |
| AF-Q9UL01-F1-model_v4 | 1 | 553 | 66 | 726 | 0.4894 |
0.6367 |
| AF-Q0VBN2-F1-model_v4 | 1 | 575 | 83 | 1145 | 0.4663 |
0.633 |
| AF-Q8IZU8-F1-model_v4 | 1 | 575 | 88 | 1150 | 0.4648 |
0.6317 |