PROTEIN: HRGMv2_2621_2_15
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Protein File & Metadata
Source:
HRGMv2_2621_2_15.pdb
Genome ID:
Protein ID:
HRGMv2_2621_2_15
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Protein Sequence
MELNQTALFQ QTLERMNNNY NQDLCLMSMP FSSPGYHTTL KGGTVHGTRE ALHYALMLLA 60 AGEERYTARA CRVIEAVTAL QDQNPGSGTY GIWPWFYEES LEQMNPPDWN WADFCGKSLC 120 VILHEYGKRL PGSTRQKAER AVLCACGSIM RRDADVSYTN VALMDCYVTI VAGQLLGHGE 180 FLEYGRSKLR RVWETAERSG GFAEYNSPTY TLVVLGDLSA MAAHIEDPVS GNYANRLAEM 240 EWQCIAEHFH VRTGQWAGPH SRCYHSILEQ GLAVKVQKGV PGLQLSPEEE ILSEVCGSRW 300 HCPERFLPLF IKPRESFDIR RFVKDGSTYL TTEYSWIHPD YTLGSFAVSD FWNQRRNLIS 360 YYGNRSEPAY LHFRVLHDGA DFTAAEINGV QNRGTVLAGI HFADDSGDEH LVFNKIKDQT 420 ICAEDIRLRF EFGGFQGETP RWERNTIVVK DQGMRYAISV PLAAFGGQAP RFTVERQEDK 480 LYADVVLFSG SRQAVCLREL KKAVCILALC AGPEAVLPAP VLTEGQGTVT AELPEHGLWI 540 CGPAQCRAEE VLRGDMRRRL CGEPIA 566
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1S8HMP8-F1-model_v4 | 1 | 565 | 19 | 632 | 0.5851 |
0.6351 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A737I0L0 | PL17_1 | 1 | 557 | 12 | 644 | 0.6025 |
0.6703 |
| AF-Q8CLP5-F1-model_v4 | PL17_1 | 1 | 562 | 2 | 648 | 0.6016 |
0.6675 |
| AF-A0A7G8UMI7-F1-model_v4 | PL37 | 1 | 515 | 2 | 597 | 0.6012 |
0.6889 |
| AF-A0A1B2DNQ4-F1-model_v4 | PL17_1 | 1 | 564 | 12 | 671 | 0.5994 |
0.6678 |
| A0A8J8SCT1 | PL12 | 1 | 562 | 26 | 647 | 0.5992 |
0.6615 |
| AF-A0A8B6L0Y4-F1-model_v4 | PL17_1 | 1 | 562 | 16 | 671 | 0.5982 |
0.6707 |
| AF-A0A6G9RJR8-F1-model_v4 | PL17_1 | 1 | 562 | 15 | 661 | 0.598 |
0.6669 |
| AF-A1JIZ0-F1-model_v4 | PL17_1 | 1 | 562 | 16 | 671 | 0.5978 |
0.6699 |
| AF-A0A7U4K2R0-F1-model_v4 | PL17_1 | 1 | 562 | 15 | 671 | 0.597 |
0.6695 |
| AF-F4N264-F1-model_v4 | PL17_1 | 1 | 562 | 16 | 671 | 0.597 |
0.6694 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517ZPE3 | CBM67 | 1 | 566 | 59 | 777 | 0.6166 |
0.7386 |
| C6XTA3 | PL37 | 1 | 515 | 26 | 634 | 0.6066 |
0.712 |
| A0A737I0L0 | PL17_1 | 1 | 557 | 12 | 644 | 0.6025 |
0.6703 |
| A0A7G8UMI7 | PL37 | 1 | 515 | 2 | 597 | 0.6012 |
0.6889 |
| A0A1B2DNQ4 | PL17_1 | 1 | 564 | 12 | 671 | 0.5994 |
0.6678 |
| A0A8J8SCT1 | PL12 | 1 | 562 | 26 | 647 | 0.5992 |
0.6615 |
| A0A6B2R9J7 | PL33_2 | 1 | 515 | 3 | 556 | 0.599 |
0.6681 |
| A0A413X139 | PL12 | 1 | 564 | 8 | 656 | 0.5923 |
0.6565 |
| G9YC51 | PL17_1 | 1 | 563 | 15 | 670 | 0.5921 |
0.6637 |
| V5JAF3 | PL17 | 6 | 562 | 1 | 652 | 0.592 |
0.6605 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q89YR9-F1-model_v4 | 1 | 564 | 94 | 702 | 0.5729 |
0.6485 |