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PROTEIN: HRGMv2_2620_8_15

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2620_8_15.pdb
Genome ID:
HRGMv2_2620
Protein ID:
HRGMv2_2620_8_15

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKLKKIVALA   TSAVLASSLL   ASCGTANRTS   YEENGETIYT   YYLNMYTQDS   TEYAEGQDTN 60
FAQLIKSKFN   IELNYDRIPR   GDWETKTNLS   YAVGNEADVT   TGGKEPQYKK   WASDDYLDPI 120
PEEAYTGDDC   ILKDWKALWS   EEDFSKVLAL   AKSSDGELYY   LPTLRQEKAQ   MCWDYRRDVF 180
EQLGITEFPS   TIDELYDVCA   KIKAAYPDKI   IISCNGMGTT   SPGSAITGFA   QAYWMPELIM 240
TQHSYVDPVT   GEYVPYALTT   DNAREMYKTI   KRFNDAGFID   KEIFTIDKDT   FSSRLAQDNC 300
FITYNYVYNI   DDFNKKTKGT   NPDKVTDWAW   TATMVTAFPE   KGTIYKRDPL   YSNWGPAFSA 360
GISEDMDRYN   ALLKMFNWFA   TEEGQLYNTY   GVKADDPEEI   KQGVSEDNYS   YSMVNGNPQY 420
NEGWYDESNP   DTDKDEDKTL   AHEYGSMGSQ   FKKQQYMFDS   IRGEQVEALY   EAFSAQPNYY 480
YFDQIPMRYT   VEEEQRFADL   EIALNAKRDE   YIQRFFSGDV   DPNSDADWNR   YISDMNKVGL 540
QEFIELQTTV   YERTQTEVAA   EEAELEAAEA   GEAAAETAAE 580
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 25 557 25 502 0.7175 0.8209
AF-A0A133D019-F1-model_v4 3 557 6 485 0.6929 0.7771
AF-K0EWS5-F1-model_v4 32 547 20 456 0.6194 0.7364
AF-Q8DNU8-F1-model_v4 32 547 34 440 0.6189 0.7688
AF-P76042-F1-model_v4 32 546 22 430 0.6105 0.7465
AF-A0A132ZDH4-F1-model_v4 32 540 25 427 0.6047 0.7461
AF-A0A133CDW9-F1-model_v4 23 549 32 444 0.6042 0.7446
AF-Q8DRJ6-F1-model_v4 17 563 39 514 0.6003 0.7003
AF-A0A0H3GHK7-F1-model_v4 32 553 16 433 0.5985 0.7243
AF-A0A133CPC5-F1-model_v4 31 546 27 423 0.5977 0.7445
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 29 557 38 506 0.7001 0.8175
AF-K8EJG7-F1-model_v4 CBM50 , CE4 29 549 30 416 0.5836 0.7375
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 550 157 797 0.4849 0.5964
AF-A0A7U1BNH7-F1-model_v4 GH10 32 556 23 745 0.4816 0.6004
A0A9Q8PNJ5 GH4 2 547 225 866 0.4669 0.5957
AF-A0A1B0VLS2-F1-model_v4 CBM0 27 577 534 976 0.4492 0.7101
A0A242CSU4 CBM35 27 569 568 1001 0.4447 0.7244
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 29 557 38 506 0.7001 0.8175
K8EJG7 CBM50 , CE4 29 549 30 416 0.5836 0.7375
A0A1Q2TKJ3 GH49 1 550 157 797 0.4849 0.5964
A0A7U1BNH7 GH10 32 556 23 745 0.4816 0.6004
A0A9Q8PNJ5 GH4 2 547 225 866 0.4669 0.5957
A0A242CSU4 CBM35 27 569 568 1001 0.4447 0.7244
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fth-assembly1.cif.gz_A 33 559 1 496 0.7702 0.8433
3omb-assembly1.cif.gz_A 29 559 1 503 0.7642 0.832
5xs8-assembly1.cif.gz_A 38 555 1 474 0.7422 0.8302
5g5y-assembly1.cif.gz_A 34 565 1 494 0.7412 0.8164
4tqu-assembly1.cif.gz_Q 36 563 7 492 0.7391 0.8243
5h6u-assembly1.cif.gz_A 36 559 4 487 0.7374 0.8217
6jhx-assembly2.cif.gz_B 36 556 7 483 0.736 0.8275
3vlw-assembly2.cif.gz_B 36 559 6 489 0.7352 0.821
5g62-assembly2.cif.gz_B 39 562 1 491 0.7289 0.8034
5suo-assembly1.cif.gz_A 38 559 1 451 0.7035 0.8058
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 32 555 29 502 0.7473 0.8586
AF-A0A0H2URD6-F1-model_v4 23 565 26 538 0.7352 0.8137
AF-Q795R2-F1-model_v4 31 557 33 498 0.6951 0.811
AF-Q578M8-F1-model_v4 32 547 18 411 0.6388 0.7888
AF-Q8FVS7-F1-model_v4 32 547 18 411 0.6387 0.7889
AF-Q2YKZ9-F1-model_v4 32 547 18 411 0.6378 0.7878
AF-P76042-F1-model_v4 32 546 22 430 0.6105 0.7465
AF-A0A0H2UMY0-F1-model_v4 3 563 11 491 0.6084 0.6902
AF-O50499-F1-model_v4 1 555 2 469 0.6029 0.6859
AF-O32156-F1-model_v4 22 549 20 422 0.6028 0.7397
Download Full SwissProt Results