PROTEIN: HRGMv2_2580_6_8
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Protein File & Metadata
Source:
HRGMv2_2580_6_8.pdb
Genome ID:
Protein ID:
HRGMv2_2580_6_8
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Protein Sequence
MKKLVTGSLL AASLFALAAC GGGSKDKDSA DFSIKDRYEL DEKTPAWKLD NKKETTKITW 60 YINSDWTALP FGEDVTTAQI KKDLNIDVEF ISGDDSKLNA MISGGDLPDI VTLTNKTGQA 120 ALKADSWAYS LNDLAKKYDP YLMNVVNKDT FKWYSLDNGK TYGYPNYSNT AADYESGNIP 180 VNDNFVIRED VYEAIGKPDI TKPENFVKAM KDIAAKYPDL VPMGFTTVGD TAGPFTDKLQ 240 DFLGVPLEDQ DGKYYDRNLD EEYLTWLSTL NQVYRDGNIS DDSFTDDGPT YDEKVKSGQY 300 ATILVAGTSG QGGNFNDFNK KSGTRYIAID GPSSTSGRKP TMNQTGISGW LSNYITKDAK 360 DPAKVTQLFT YLIDEPGQIL TKYGVEGVTY AYNDEGKIDY LPEVAKLEQT DNEAYNKKYG 420 ISRFNYFNND RVNALKVKTE DALTQMQAWG KGKLVPHFVI ENINPDLGTP EARSNEAIET 480 KLNSSVISMI RASDEKAFDK TLSEYKTFLD DNKWDEIKAI KSEKMADNRE KLQ 533
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 29 | 530 | 26 | 502 | 0.6997 |
0.7758 |
| AF-A0A133D019-F1-model_v4 | 10 | 531 | 14 | 485 | 0.6654 |
0.7337 |
| AF-Q8DNU2-F1-model_v4 | 21 | 524 | 16 | 445 | 0.6176 |
0.7112 |
| AF-Q8DNH8-F1-model_v4 | 15 | 523 | 17 | 419 | 0.6144 |
0.7288 |
| AF-A0A133CPC5-F1-model_v4 | 35 | 520 | 28 | 423 | 0.6082 |
0.7361 |
| AF-A0A0H3GHK7-F1-model_v4 | 51 | 524 | 18 | 431 | 0.6078 |
0.718 |
| AF-Q9HZ48-F1-model_v4 | 51 | 520 | 20 | 420 | 0.6077 |
0.7254 |
| AF-K0F7X1-F1-model_v4 | 56 | 517 | 28 | 409 | 0.6055 |
0.7433 |
| AF-Q8DRJ6-F1-model_v4 | 14 | 533 | 36 | 514 | 0.6055 |
0.6805 |
| AF-K0F002-F1-model_v4 | 28 | 520 | 40 | 439 | 0.603 |
0.7351 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 25 | 530 | 31 | 506 | 0.7251 |
0.806 |
| A0A9Q8PNJ5 | GH4 | 1 | 520 | 104 | 866 | 0.4796 |
0.6116 |
| UJP10085.1 | GH154 | 10 | 493 | 404 | 1168 | 0.3578 |
0.5648 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 25 | 530 | 31 | 506 | 0.7251 |
0.806 |
| A0A9Q8PNJ5 | GH4 | 1 | 520 | 104 | 866 | 0.4796 |
0.6116 |
| UJP10085.1 | GH154 | 10 | 493 | 404 | 1168 | 0.3578 |
0.5648 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xs8-assembly1.cif.gz_A | 55 | 525 | 1 | 474 | 0.7709 |
0.8368 |
| 5g62-assembly2.cif.gz_B | 56 | 533 | 1 | 491 | 0.7459 |
0.8133 |
| 6fth-assembly1.cif.gz_A | 52 | 533 | 1 | 496 | 0.7445 |
0.8103 |
| 3vlw-assembly2.cif.gz_B | 47 | 533 | 1 | 489 | 0.7432 |
0.7968 |
| 6jhx-assembly2.cif.gz_B | 37 | 527 | 1 | 483 | 0.7423 |
0.7985 |
| 4tqu-assembly1.cif.gz_Q | 37 | 533 | 1 | 492 | 0.7421 |
0.7916 |
| 5h6u-assembly1.cif.gz_A | 47 | 530 | 1 | 487 | 0.741 |
0.7983 |
| 3omb-assembly1.cif.gz_A | 32 | 530 | 1 | 503 | 0.7406 |
0.7862 |
| 5g5y-assembly1.cif.gz_A | 51 | 533 | 1 | 494 | 0.7185 |
0.7821 |
| 5suo-assembly1.cif.gz_A | 54 | 533 | 1 | 451 | 0.6865 |
0.7622 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 29 | 533 | 30 | 538 | 0.7249 |
0.7865 |
| AF-P37966-F1-model_v4 | 33 | 530 | 28 | 502 | 0.7173 |
0.7966 |
| AF-Q795R2-F1-model_v4 | 13 | 530 | 5 | 498 | 0.6842 |
0.7349 |
| AF-Q8FVS7-F1-model_v4 | 52 | 521 | 22 | 411 | 0.6442 |
0.7783 |
| AF-Q2YKZ9-F1-model_v4 | 52 | 521 | 22 | 411 | 0.6437 |
0.7773 |
| AF-Q578M8-F1-model_v4 | 52 | 521 | 22 | 411 | 0.6434 |
0.7773 |
| AF-O50499-F1-model_v4 | 10 | 529 | 15 | 469 | 0.6322 |
0.7125 |
| AF-O32156-F1-model_v4 | 22 | 523 | 15 | 422 | 0.6201 |
0.7299 |
| AF-A0A0H2UMY0-F1-model_v4 | 4 | 533 | 16 | 491 | 0.6154 |
0.681 |
| AF-Q55471-F1-model_v4 | 25 | 520 | 20 | 421 | 0.6071 |
0.7238 |