PROTEIN: HRGMv2_2501_11_16
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Protein File & Metadata
Source:
HRGMv2_2501_11_16.pdb
Genome ID:
Protein ID:
HRGMv2_2501_11_16
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Protein Sequence
MENLIILDSE LQKKNEEHYQ SLHGGSRVVY TNYESPLIRR VRNFKYIGSA LYHFLMWKMS 60 YDYARKFIKY DVKKIICVNP LVGIFLGILN KSGKEITLAG FLFENKKNKI YYYLRKQLVR 120 KSFQNIRNII VYGSKEIHYY SELFPEFQEK FKFIHYGLDY DNQLTYQGSL PTKYIFSGGG 180 SNRDYETLVK AVEASNLSMP CVIATQPWRV PTHGSNIQVL SDVVVETFGD VLAKSDFLVL 240 SLKDIDLSAG HMVMLQAMSL GVPIIVNDIP SVRDYVNESL VTFYPSGDFE KLAQIIEDFD 300 PSVDEVLQKV AKAKNLYFEQ YTSIKLMDRL LDF 333
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EV23-F1-model_v4 | 2 | 333 | 1 | 332 | 0.7341 |
0.7671 |
| AF-Q59002-F1-model_v4 | 2 | 333 | 1 | 380 | 0.7323 |
0.8119 |
| AF-K0EWM5-F1-model_v4 | 2 | 333 | 1 | 333 | 0.7295 |
0.7614 |
| AF-A0A1A7SPW8-F1-model_v4 | 1 | 333 | 4 | 373 | 0.7292 |
0.7976 |
| AF-K0EV99-F1-model_v4 | 5 | 333 | 1 | 350 | 0.7279 |
0.7819 |
| AF-K0EZX0-F1-model_v4 | 1 | 333 | 6 | 360 | 0.7257 |
0.7809 |
| AF-Q9HTB9-F1-model_v4 | 2 | 333 | 1 | 368 | 0.7235 |
0.79 |
| AF-P9WMZ1-F1-model_v4 | 2 | 333 | 1 | 381 | 0.7232 |
0.8001 |
| AF-Q9I1N0-F1-model_v4 | 1 | 333 | 1 | 362 | 0.7213 |
0.7793 |
| AF-X8F0S0-F1-model_v4 | 1 | 333 | 2 | 342 | 0.7151 |
0.7583 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| R5JPB5 | GT4 | 1 | 333 | 18 | 348 | 0.8245 |
0.8682 |
| A0A1C7I871 | GT4 | 1 | 333 | 3 | 332 | 0.8225 |
0.851 |
| AF-A0A1C7I871-F1-model_v4 | GT4 | 1 | 333 | 3 | 332 | 0.8225 |
0.851 |
| AF-A0A7T5E548-F1-model_v4 | GT4 | 1 | 333 | 1 | 335 | 0.8151 |
0.8446 |
| AF-Q1GJ84-F1-model_v4 | GT4 | 2 | 333 | 1 | 328 | 0.814 |
0.8515 |
| WFS25211.1 | GT4 | 1 | 333 | 1 | 331 | 0.8137 |
0.8423 |
| AF-K9UX29-F1-model_v4 | GT4 | 1 | 333 | 1 | 334 | 0.8131 |
0.8458 |
| A0A255SXN7 | GT4 | 1 | 333 | 14 | 339 | 0.8122 |
0.8587 |
| AF-A0A1Z4NGL2-F1-model_v4 | GT4 | 1 | 333 | 1 | 335 | 0.8088 |
0.8452 |
| A0A1I7LW09 | GT4 | 1 | 333 | 1 | 331 | 0.8085 |
0.8394 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| R5JPB5 | GT4 | 1 | 333 | 18 | 348 | 0.8245 |
0.8682 |
| A0A1C7I871 | GT4 | 1 | 333 | 3 | 332 | 0.8225 |
0.851 |
| A6BIG0 | GT4 | 1 | 333 | 7 | 338 | 0.8157 |
0.8459 |
| Q1GJ84 | GT4 | 2 | 333 | 1 | 328 | 0.814 |
0.8515 |
| WFS25211.1 | GT4 | 1 | 333 | 1 | 331 | 0.8137 |
0.8423 |
| A0A255SXN7 | GT4 | 1 | 333 | 14 | 339 | 0.8122 |
0.8587 |
| A0A1I7LW09 | GT4 | 1 | 333 | 1 | 331 | 0.8085 |
0.8394 |
| WDI30737.1 | GT4 | 1 | 333 | 6 | 333 | 0.8082 |
0.8492 |
| A0A250JGQ2 | GT4 | 1 | 333 | 14 | 347 | 0.8052 |
0.8548 |
| WCR08092.1 | GT4 | 1 | 333 | 5 | 329 | 0.8048 |
0.8616 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3mbo-assembly1.cif.gz_B | 1 | 333 | 1 | 361 | 0.7321 |
0.7896 |
| 3mbo-assembly3.cif.gz_F | 1 | 333 | 1 | 361 | 0.732 |
0.7891 |
| 3mbo-assembly4.cif.gz_H | 1 | 333 | 1 | 361 | 0.7303 |
0.7875 |
| 6tvp-assembly1.cif.gz_A | 1 | 333 | 2 | 380 | 0.7297 |
0.8019 |
| 3mbo-assembly4.cif.gz_G | 1 | 333 | 1 | 357 | 0.7284 |
0.7826 |
| 2jjm-assembly1.cif.gz_B | 1 | 333 | 1 | 354 | 0.7279 |
0.777 |
| 3mbo-assembly1.cif.gz_A | 1 | 333 | 1 | 364 | 0.727 |
0.7873 |
| 3mbo-assembly2.cif.gz_C | 1 | 333 | 1 | 365 | 0.725 |
0.7859 |
| 3mbo-assembly3.cif.gz_E | 1 | 333 | 1 | 367 | 0.7243 |
0.7869 |
| 5d01-assembly1.cif.gz_B | 1 | 333 | 1 | 355 | 0.7183 |
0.7685 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P54490-F1-model_v4 | 2 | 333 | 1 | 348 | 0.7334 |
0.7877 |
| AF-Q59002-F1-model_v4 | 2 | 333 | 1 | 380 | 0.7323 |
0.8119 |
| AF-D4GU66-F1-model_v4 | 7 | 333 | 8 | 367 | 0.7286 |
0.8043 |
| AF-Q65CC7-F1-model_v4 | 7 | 333 | 1 | 380 | 0.7241 |
0.8122 |
| AF-P9WMZ1-F1-model_v4 | 2 | 333 | 1 | 381 | 0.7232 |
0.8001 |
| AF-A0R2E2-F1-model_v4 | 2 | 333 | 1 | 381 | 0.7225 |
0.7987 |
| AF-P9WMZ0-F1-model_v4 | 2 | 333 | 1 | 381 | 0.721 |
0.7978 |
| AF-P42982-F1-model_v4 | 1 | 333 | 2 | 369 | 0.7097 |
0.7738 |
| AF-Q93P60-F1-model_v4 | 1 | 333 | 1 | 383 | 0.7085 |
0.7904 |
| AF-Q0P9C7-F1-model_v4 | 1 | 333 | 1 | 362 | 0.7069 |
0.7641 |