PROTEIN: HRGMv2_2478_3_10
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Protein File & Metadata
Source:
HRGMv2_2478_3_10.pdb
Genome ID:
Protein ID:
HRGMv2_2478_3_10
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Protein Sequence
MKINIFDYYD GKTQRLLNSL RTAGISRNNL FVHYAGDLPE NAISPFSFFM EIDHQKREGL 60 FFDQVEVPEF YDIRHVSGSN ANIENMGHVV GSVNYSKKGY RLVDTVDWYL NGDPKKIIKK 120 DFYNISGKLY ATSFFSEGKP YLTEYYKDGE AVVIENLVTH KIQLIIKERK IIFNNLTEFF 180 IFFLEKAEIN PDDIFINSLN YPLFIAKIVA VKPNTTLFWQ EALGEKIPGN MESELNSPKA 240 LKQIIFNNED HLKQVESQYV STKVNLNYLS DIGEFTRKNT FIKKAFILTN SDRLYGLEDI 300 LNTFNELDIT VAAYTNMSTK LEHLGDKYNN LHLIPSLAPK KLAAEMNKAD IYLDINDGMK 360 VDNVLKKAYR QNMIILSMDQ VKSSNYKSLN FYDVRSLCND LASIMSSENT WRSSLNKMIQ 420 QNGPSSKVSD YKQVLSIKN 439
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FUW8-F1-model_v4 | 2 | 439 | 1 | 452 | 0.9114 |
0.9377 |
| AF-Q2G0L2-F1-model_v4 | 1 | 439 | 1 | 496 | 0.5398 |
0.5915 |
| AF-Q2G0L3-F1-model_v4 | 1 | 439 | 1 | 490 | 0.5375 |
0.588 |
| AF-K0F3N9-F1-model_v4 | 1 | 439 | 2 | 365 | 0.5153 |
0.5886 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7H1MK01-F1-model_v4 | GT8 | 1 | 439 | 1 | 439 | 0.9858 |
0.9905 |
| A0A9X4NKF6 | GT8 | 1 | 437 | 2 | 440 | 0.9761 |
0.9869 |
| AF-A0A7T7SW45-F1-model_v4 | GT8 | 2 | 437 | 1 | 443 | 0.9259 |
0.9467 |
| A0A6P2CPU4 | GT8 | 2 | 439 | 1 | 446 | 0.9221 |
0.9418 |
| AF-A0A240BRS9-F1-model_v4 | GT8 | 2 | 439 | 1 | 447 | 0.9204 |
0.9417 |
| AF-A0A222W666-F1-model_v4 | GT8 | 2 | 436 | 1 | 443 | 0.9193 |
0.9423 |
| AF-A0A6P1WV11-F1-model_v4 | GT8 | 2 | 439 | 1 | 448 | 0.9185 |
0.9418 |
| AF-A0A3S6QXS1-F1-model_v4 | GT8 | 2 | 436 | 1 | 437 | 0.9173 |
0.9352 |
| AF-A3CM61-F1-model_v4 | GT8 | 2 | 439 | 1 | 447 | 0.9169 |
0.9388 |
| AF-A8AWV5-F1-model_v4 | GT8 | 2 | 439 | 1 | 446 | 0.9166 |
0.9411 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9X4NKF6 | GT8 | 1 | 437 | 2 | 440 | 0.9761 |
0.9869 |
| A0A6P2CPU4 | GT8 | 2 | 439 | 1 | 446 | 0.9221 |
0.9418 |
| A0A222W666 | GT8 | 2 | 436 | 1 | 443 | 0.9193 |
0.9423 |
| A0A6P1WV11 | GT8 | 2 | 439 | 1 | 448 | 0.9185 |
0.9418 |
| A0A9P2FBH2 | GT8 | 1 | 439 | 1 | 443 | 0.915 |
0.9321 |
| A0A6L8MZD6 | GT8 | 2 | 439 | 1 | 440 | 0.9144 |
0.9308 |
| Q4L9N3 | GT8 | 1 | 439 | 5 | 450 | 0.9128 |
0.9357 |
| A0A3S6QT94 | GT8 | 2 | 437 | 1 | 440 | 0.911 |
0.931 |
| QRN91317.1 | GT8 | 2 | 439 | 1 | 443 | 0.91 |
0.9294 |
| A0A089QAW1 | GT8 | 1 | 437 | 2 | 443 | 0.909 |
0.93 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5e9u-assembly2.cif.gz_H | 2 | 439 | 1 | 445 | 0.8989 |
0.9214 |
| 6oyc-assembly4.cif.gz_A | 1 | 438 | 1 | 498 | 0.6455 |
0.7073 |
| 5vae-assembly5.cif.gz_G | 1 | 439 | 1 | 509 | 0.6371 |
0.7046 |
| 5vae-assembly5.cif.gz_E | 1 | 439 | 1 | 509 | 0.6361 |
0.7033 |
| 6lnw-assembly1.cif.gz_A | 1 | 439 | 1 | 491 | 0.633 |
0.6904 |
| 5vae-assembly1.cif.gz_A | 1 | 439 | 1 | 511 | 0.6314 |
0.7013 |
| 5vaf-assembly1.cif.gz_A | 1 | 439 | 1 | 506 | 0.5688 |
0.6266 |
| 5vaf-assembly4.cif.gz_D | 1 | 439 | 1 | 507 | 0.5674 |
0.626 |
| 7ec7-assembly1.cif.gz_A | 1 | 438 | 1 | 496 | 0.5625 |
0.62 |
| 5vaf-assembly2.cif.gz_B | 1 | 439 | 1 | 505 | 0.5611 |
0.6208 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2UR90-F1-model_v4 | 2 | 439 | 1 | 445 | 0.9146 |
0.9345 |
| AF-Q79T00-F1-model_v4 | 2 | 439 | 1 | 446 | 0.8935 |
0.9208 |
| AF-A0A0S4NND9-F1-model_v4 | 2 | 439 | 1 | 441 | 0.8691 |
0.8917 |
| AF-A1C3M0-F1-model_v4 | 2 | 439 | 1 | 439 | 0.8571 |
0.8781 |
| AF-Q3S2Y1-F1-model_v4 | 2 | 439 | 1 | 440 | 0.8247 |
0.8528 |
| AF-Q9AET9-F1-model_v4 | 1 | 439 | 1 | 522 | 0.6199 |
0.6935 |
| AF-A1C3L9-F1-model_v4 | 1 | 439 | 1 | 504 | 0.5335 |
0.5904 |
| AF-Q9AET5-F1-model_v4 | 1 | 439 | 1 | 506 | 0.5295 |
0.5848 |
| AF-Q3S2Y2-F1-model_v4 | 1 | 439 | 1 | 502 | 0.5286 |
0.5862 |