PROTEIN: HRGMv2_2464_31_18
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Protein File & Metadata
Source:
HRGMv2_2464_31_18.pdb
Genome ID:
Protein ID:
HRGMv2_2464_31_18
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Protein Sequence
MSQAKVYVIH ENLEWTQHLV KWLEEKDVPY ELWDLSSGIL DLQSPPPTGI FYNRMSASSH 60 TRGHRYAPEF TEQVLAWLEA HGRKVVNGSG AINLEISKIK QYLKLSEAGI ASPETVAVLG 120 QENILEAARK LDIYPLITKH NRAGKGLGVQ LFNSEEELEA YVDSPAFEPS VDGITLLQAY 180 IKPADGRIRR SEFINQKFLY TVSIDSSDGF QLCPADGCQI GQKPAQLETS DKFQITEPLP 240 ASQRQAYETF LAKAGIDVAA IEWVESESGQ IYVYDVNTNT NYNPTAEEKA GIFAHQHLAE 300 YLKNELAASY PE 312
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58407-F1-model_v4 | 3 | 309 | 1 | 288 | 0.8065 |
0.8597 |
| AF-P45241-F1-model_v4 | 4 | 311 | 1 | 302 | 0.7971 |
0.8303 |
| AF-Q58037-F1-model_v4 | 4 | 309 | 1 | 291 | 0.7953 |
0.8431 |
| AF-P0C0U4-F1-model_v4 | 4 | 310 | 1 | 293 | 0.7678 |
0.8242 |
| AF-Q32ID0-F1-model_v4 | 4 | 310 | 1 | 293 | 0.7672 |
0.8237 |
| AF-P0A2U2-F1-model_v4 | 4 | 310 | 1 | 293 | 0.7659 |
0.8226 |
| AF-Q9HTZ2-F1-model_v4 | 4 | 311 | 1 | 294 | 0.7636 |
0.8191 |
| AF-A0A0H3GM45-F1-model_v4 | 4 | 310 | 1 | 293 | 0.7633 |
0.82 |
| AF-A0A0H3GML6-F1-model_v4 | 2 | 309 | 1 | 306 | 0.7548 |
0.7874 |
| AF-Q8ZRU1-F1-model_v4 | 2 | 309 | 1 | 306 | 0.7545 |
0.787 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7S5R1D6 | GH25 | 3 | 305 | 2 | 265 | 0.6858 |
0.7668 |
| A0A7S5UXL7 | GH89 | 5 | 309 | 1 | 263 | 0.6338 |
0.717 |
| AF-R4T1S0-F1-model_v4 | GT2 | 1 | 309 | 337 | 644 | 0.5309 |
0.7629 |
| AF-A0A1H2I7W0-F1-model_v4 | GT2 | 1 | 309 | 337 | 644 | 0.5308 |
0.7629 |
| AF-E1R851-F1-model_v4 | GT2 | 1 | 311 | 238 | 556 | 0.5308 |
0.7359 |
| AF-A0A075UWS8-F1-model_v4 | GT2 | 1 | 309 | 337 | 644 | 0.53 |
0.7618 |
| AF-A0A193C563-F1-model_v4 | GT2 | 1 | 309 | 337 | 644 | 0.5287 |
0.7599 |
| AF-A0A7D4BHE6-F1-model_v4 | GT4 | 1 | 312 | 1 | 461 | 0.5277 |
0.7494 |
| M2QHQ6 | GT2 | 1 | 309 | 337 | 644 | 0.5268 |
0.7572 |
| AF-A0A2L0EWE4-F1-model_v4 | GT2 , GT25 | 1 | 309 | 758 | 1076 | 0.4698 |
0.7426 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7S5R1D6 | GH25 | 3 | 305 | 2 | 265 | 0.6858 |
0.7668 |
| A0A7S5UXL7 | GH89 | 5 | 309 | 1 | 263 | 0.6338 |
0.717 |
| E1R851 | GT2 | 1 | 311 | 238 | 556 | 0.5308 |
0.7359 |
| A0A7D4BHE6 | GT4 | 1 | 312 | 1 | 461 | 0.5277 |
0.7494 |
| M2QHQ6 | GT2 | 1 | 309 | 337 | 644 | 0.5268 |
0.7572 |
| A0A2L0EWE4 | GT2 , GT25 | 1 | 309 | 758 | 1076 | 0.4698 |
0.7426 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3vpb-assembly1.cif.gz_D | 4 | 307 | 1 | 281 | 0.8068 |
0.8706 |
| 3vpd-assembly1.cif.gz_A-2 | 5 | 309 | 1 | 281 | 0.7979 |
0.86 |
| 3vpc-assembly1.cif.gz_C | 4 | 309 | 1 | 275 | 0.7872 |
0.8596 |
| 5k2m-assembly1.cif.gz_A | 4 | 309 | 1 | 273 | 0.7812 |
0.8559 |
| 7qys-assembly4.cif.gz_O | 4 | 309 | 1 | 290 | 0.7805 |
0.8316 |
| 5k2m-assembly2.cif.gz_D | 4 | 309 | 1 | 270 | 0.776 |
0.8541 |
| 7qys-assembly2.cif.gz_H | 4 | 309 | 1 | 284 | 0.7738 |
0.832 |
| 7qyr-assembly2.cif.gz_G | 4 | 309 | 1 | 286 | 0.7728 |
0.8292 |
| 7qys-assembly1.cif.gz_B | 4 | 309 | 1 | 281 | 0.7723 |
0.8344 |
| 7qys-assembly2.cif.gz_F | 4 | 309 | 1 | 284 | 0.7717 |
0.83 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6M0U8-F1-model_v4 | 5 | 310 | 1 | 285 | 0.8091 |
0.866 |
| AF-Q58407-F1-model_v4 | 3 | 309 | 1 | 288 | 0.8065 |
0.8597 |
| AF-Q976J9-F1-model_v4 | 4 | 309 | 1 | 285 | 0.8039 |
0.8609 |
| AF-Q970U6-F1-model_v4 | 4 | 311 | 1 | 282 | 0.8033 |
0.866 |
| AF-Q4J8E7-F1-model_v4 | 4 | 311 | 1 | 282 | 0.8029 |
0.8658 |
| AF-Q5SH23-F1-model_v4 | 5 | 309 | 1 | 280 | 0.8011 |
0.8645 |
| AF-A5UEH4-F1-model_v4 | 4 | 311 | 1 | 302 | 0.799 |
0.832 |
| AF-P45241-F1-model_v4 | 4 | 311 | 1 | 302 | 0.7971 |
0.8303 |
| AF-Q58037-F1-model_v4 | 4 | 309 | 1 | 291 | 0.7953 |
0.8431 |
| AF-Q7SI95-F1-model_v4 | 12 | 309 | 1 | 275 | 0.7948 |
0.865 |