PROTEIN: HRGMv2_2454_1_60
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Protein File & Metadata
Source:
HRGMv2_2454_1_60.pdb
Genome ID:
Protein ID:
HRGMv2_2454_1_60
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Protein Sequence
MKQIKRIGVC AIVILAAFFY AHIAKTNAVY DGQNDSNTFE ITENSQLTVE QEFICQEARI 60 DGIQIKCQVQ QTGNTSVGLT LTDVASGDTV AVCRKELSEI KSGKWNTFSF EMVENCKGKT 120 YRLELEGQDV IWFACRGAQP KTDLYINGSE QDGTLLVKTV SNRFDVETFG VFLILVLYVY 180 LFFRFLNRLF SR 192
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0R0JCY4-F1-model_v4 | 18 | 163 | 13 | 170 | 0.4994 |
0.6324 |
| AF-Q9C8U9-F1-model_v4 | 23 | 163 | 8 | 165 | 0.497 |
0.6412 |
| AF-I1NDE3-F1-model_v4 | 21 | 163 | 18 | 173 | 0.4963 |
0.6446 |
| AF-Q5RKI2-F1-model_v4 | 1 | 163 | 159 | 488 | 0.4299 |
0.7214 |
| AF-Q9H0C5-F1-model_v4 | 1 | 163 | 153 | 482 | 0.4279 |
0.7145 |
| AF-A0A2R8Q260-F1-model_v4 | 1 | 163 | 259 | 589 | 0.4113 |
0.7253 |
| AF-Q1LXS8-F1-model_v4 | 1 | 163 | 11 | 595 | 0.4098 |
0.7238 |
| AF-Q20183-F1-model_v4 | 5 | 166 | 415 | 602 | 0.4038 |
0.7196 |
| AF-Q5TZE1-F1-model_v4 | 14 | 163 | 323 | 482 | 0.3964 |
0.7118 |
| AF-Q8NCR0-F1-model_v4 | 21 | 167 | 122 | 284 | 0.3699 |
0.6779 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0E3QJR3-F1-model_v4 | GT2 | 5 | 190 | 73 | 734 | 0.4452 |
0.7456 |
| AF-A0A0E3PR73-F1-model_v4 | GT2 | 1 | 192 | 281 | 1066 | 0.4346 |
0.756 |
| AF-Q97GN9-F1-model_v4 | GT0 , GT2 | 1 | 166 | 524 | 944 | 0.4312 |
0.8472 |
| AF-A0A0E3L941-F1-model_v4 | GT2 | 12 | 192 | 302 | 1059 | 0.4277 |
0.7875 |
| AF-A0A1A9HXA0-F1-model_v4 | GH43_37 | 24 | 164 | 353 | 509 | 0.4257 |
0.8331 |
| AF-A0A3G9JMY5-F1-model_v4 | CBM32 | 23 | 192 | 184 | 553 | 0.4235 |
0.7909 |
| AF-A0A1S8M8R4-F1-model_v4 | GT2 , GT4 | 1 | 166 | 478 | 945 | 0.4233 |
0.8295 |
| AF-R4K848-F1-model_v4 | GT0 , GT2 | 2 | 166 | 532 | 926 | 0.4187 |
0.8206 |
| AF-A0A6I6VI58-F1-model_v4 | GH78 | 25 | 190 | 21 | 448 | 0.4132 |
0.7865 |
| AF-A0A0E3PHH4-F1-model_v4 | GT2 | 19 | 190 | 426 | 1082 | 0.4045 |
0.7795 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6B9Z7G7 | GH43_37 | 32 | 165 | 89 | 240 | 0.5215 |
0.8282 |
| A0A7G8UNM4 | CBM32 | 2 | 181 | 39 | 278 | 0.4488 |
0.7897 |
| A0A0E3PR73 | GT2 | 1 | 192 | 281 | 1066 | 0.4346 |
0.756 |
| UKS27947.1 | CBM32 | 13 | 192 | 28 | 563 | 0.4282 |
0.7598 |
| A0A0E3L941 | GT2 | 12 | 192 | 302 | 1059 | 0.4277 |
0.7875 |
| A0A3G9JMY5 | CBM32 | 23 | 192 | 184 | 553 | 0.4235 |
0.7909 |
| D2RDR5 | GT2 | 3 | 182 | 425 | 1038 | 0.3987 |
0.7386 |
| A0A1I4Z4J8 | GH78 | 24 | 189 | 29 | 283 | 0.3941 |
0.7502 |
| A0A2Z3R6F8 | GT2 | 1 | 167 | 606 | 1276 | 0.3923 |
0.7921 |
| A0A1D8K9B5 | GT2 | 1 | 163 | 637 | 1307 | 0.3901 |
0.8057 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3no8-assembly2.cif.gz_B | 23 | 164 | 1 | 157 | 0.5948 |
0.7469 |
| 7yaq-assembly1.cif.gz_A-2 | 25 | 161 | 1 | 150 | 0.5138 |
0.6515 |
| 8h2i-assembly1.cif.gz_bG | 13 | 163 | 138 | 360 | 0.4038 |
0.7325 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9C8U9-F1-model_v4 | 23 | 163 | 8 | 165 | 0.497 |
0.6412 |
| AF-Q9H0C5-F1-model_v4 | 1 | 163 | 153 | 482 | 0.4279 |
0.7145 |
| AF-Q5TZE1-F1-model_v4 | 14 | 163 | 323 | 482 | 0.3964 |
0.7118 |
| AF-Q8NCR0-F1-model_v4 | 21 | 167 | 122 | 284 | 0.3699 |
0.6779 |
| AF-Q5M900-F1-model_v4 | 21 | 167 | 111 | 272 | 0.3692 |
0.6719 |
| AF-Q8BG28-F1-model_v4 | 22 | 167 | 123 | 286 | 0.3662 |
0.6753 |