PROTEIN: HRGMv2_2453_2_220
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Protein File & Metadata
Source:
HRGMv2_2453_2_220.pdb
Genome ID:
Protein ID:
HRGMv2_2453_2_220
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Protein Sequence
MDTLVSLKST YREFKYDHEI KLASVKGELK NSLRYGEAYE LPLQEKFVLF YLGNSKFIGE 60 TMIRLMEYYA QTKEEKQILI HIIAGKRVQA DQIPVSLHDH IIRPGSKEAV KDFAMAQYII 120 TKGILPKYFV RKPDQKVAQI FDQIDTTFDK KRNAENKISW ILNSSDIFVK TEDKDMFLDH 180 YYIPEEYERR IHEIKKDSDP AEDIINKMNP GNKMQEKESD NKKKKNILII ASSWKIGGHE 240 ECYIKLMADN INYEKYDLTL VTKRPFGGNS EEALQSFNDK MRIIYRKGTF SCSQKEYIKT 300 QYLLKNFDSF EEIEKAYPML DRKIIEREKR RILGDMEFSE VIYIGRHSAV WSMLAENIKA 360 DCKLRILNHD LNDELLSYKT EEKQLGFYNK MKLYDHIFDH IVFTKPQYMQ STIRERYLKK 420 AKVTSFEFAN QITKNQEKKK AQCVEYQGRR YFAGQRYEYS HGGERIVLFP LPKTEEKAYL 480 ANGDLCDKKV LLNIFEKLYK QDKNSLLIVY GREAETIRQA AKEYRLDERI EILERKALEM 540 NHDPREYFKY FEGCIITDQE DKNGMISIVM SLLNKKLIVL KDDKIIDLNN RRFEDVSDYN 600 EYIKERWDQF YGGYGQNE 618
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A4P8IHM8-F1-model_v4 | GT4 | 2 | 465 | 1 | 644 | 0.6042 |
0.8228 |
| AF-F9VEG9-F1-model_v4 | GT4 | 2 | 462 | 3 | 550 | 0.5864 |
0.7847 |
| F9VEG9 | GT4 | 2 | 462 | 3 | 550 | 0.5864 |
0.7847 |
| AF-A0AM26-F1-model_v4 | GT4 | 23 | 468 | 1 | 536 | 0.5671 |
0.7389 |
| AF-A0A3G4QVW2-F1-model_v4 | GT4 | 5 | 468 | 7 | 746 | 0.5599 |
0.812 |
| A0A143PCD6 | GT4 | 2 | 468 | 4 | 743 | 0.559 |
0.8035 |
| AF-A0A143PCD6-F1-model_v4 | GT4 | 2 | 468 | 4 | 743 | 0.559 |
0.8035 |
| AMG34300.1 | GT4 | 5 | 465 | 8 | 743 | 0.557 |
0.8106 |
| A0A6N2R247 | GT4 | 1 | 470 | 3 | 840 | 0.5509 |
0.8273 |
| A0A3N9TRE4 | GT4 | 30 | 468 | 1 | 524 | 0.5497 |
0.7169 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P8IHM8 | GT4 | 2 | 465 | 1 | 644 | 0.6042 |
0.8228 |
| A0A143PCD6 | GT4 | 2 | 468 | 4 | 743 | 0.559 |
0.8035 |
| AMG34300.1 | GT4 | 5 | 465 | 8 | 743 | 0.557 |
0.8106 |
| A0A6N2R247 | GT4 | 1 | 470 | 3 | 840 | 0.5509 |
0.8273 |
| A0A3N9TRE4 | GT4 | 30 | 468 | 1 | 524 | 0.5497 |
0.7169 |
| A5Z761 | GT4 | 1 | 468 | 3 | 808 | 0.5424 |
0.8043 |
| A0A150L2D2 | GT4 | 1 | 468 | 12 | 832 | 0.5411 |
0.8099 |
| A0A3G5F4I4 | GT4 | 5 | 466 | 13 | 837 | 0.5399 |
0.8221 |
| A0A0D1LLJ8 | GT4 | 10 | 466 | 1 | 794 | 0.5379 |
0.8075 |
| A0A140DZ35 | GT4 | 13 | 468 | 8 | 804 | 0.5371 |
0.8151 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.