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PROTEIN: HRGMv2_2453_11_33

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2453_11_33.pdb
Genome ID:
HRGMv2_2453
Protein ID:
HRGMv2_2453_11_33

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRTMKRVAAF   AMTIAVMMTS   GVTTKAAVTT   AQPAKSSSEA   QLKWAHRIST   GYDTLSEIEI 60
VGKYIYAADD   SQHRIMKINK   ETGEIEKEHQ   YYDTNYTQYY   VGNIGYGDGK   VFVGYANTKD 120
DSGNNAANGR   IEAFDAETLE   PVWISETTSH   TETDAETGET   KTVNDEVASK   MLYDDGHLYF 180
GTGVSSGSGK   YYELDTKDED   PSKTDEIKSI   KEITSSEGNY   YLKKGIKAGQ   YVIISDTTGT 240
ITSIDAKNND   QIVDTKAIGE   KFSGGIAYDK   TTNTIYFVVG   TNDLYGVKIN   DDGTFGETKK 300
VRVYESGYSA   MIPEVYNGKV   YVSGSTGTNA   FESKGYLAVV   DAKNYKVNYT   VELPAYSQGE 360
MLVAKTGENS   VRLYFTVNYE   ETDKDYNPLS   GGGIYSIEDK   AGATSAKLET   IYQPSKEYIQ 420
YCMNSIHADE   NGVLYYINDS   RTIFAVGKKA   TTTKPVTVKP   ITKTQTSTRS   VKLTWKKNKS 480
AKGYVIYAKA   GKGKYTKIAT   AGKTTKKTVT   VKSGTSYKFK   VKPYKNTKKN   GKTVKKYYKA 540
YTAKAKYGNK   TVKVVYKNIT   GYTSYRIDMK   VGNGSYKKVL   TSKKTGTLTL   TYTQKKAKVG 600
KSYKFRLVGI   KTVNGKSVEK   TIK 623
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1C1C8A4-F1-model_v4 38 448 26 375 0.627 0.842
AF-A0A3P7QL55-F1-model_v4 28 448 38 426 0.6057 0.7906
AF-A0A077Z7Q6-F1-model_v4 28 445 30 389 0.5988 0.7996
AF-Q4DEV1-F1-model_v4 20 450 64 446 0.5942 0.8061
AF-Q583P8-F1-model_v4 20 450 92 455 0.5924 0.8501
AF-Q4DB50-F1-model_v4 28 450 94 446 0.589 0.8617
AF-A0A0K0DYQ2-F1-model_v4 28 448 86 471 0.5705 0.7907
AF-P39706-F1-model_v4 30 617 11 412 0.5676 0.7191
AF-F1QDT3-F1-model_v4 28 448 86 476 0.5663 0.78
AF-A0A158N866-F1-model_v4 28 448 95 482 0.5641 0.7877
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-E8V3F0-F1-model_v4 CBM13 16 623 30 629 0.5641 0.6157
AF-A0A2Z5FZY7-F1-model_v4 CBM13 19 456 2 529 0.5626 0.7927
AF-A0A402CZV9-F1-model_v4 CBM13 17 453 36 554 0.5471 0.8157
AF-A0A402D1M8-F1-model_v4 CBM13 16 453 35 563 0.5424 0.8138
AF-G8NPA5-F1-model_v4 CBM13 17 453 31 566 0.5369 0.8106
AF-S0EV13-F1-model_v4 CBM96 16 589 28 894 0.5023 0.6935
AF-A0A7H8PZ23-F1-model_v4 CBM32 16 452 45 569 0.4933 0.7795
AF-A0A385SKX5-F1-model_v4 CBM32 17 622 20 674 0.486 0.6481
WJK48174.1 CBM32 17 608 20 949 0.4819 0.6798
AF-A0A5B8V8R9-F1-model_v4 CBM32 17 623 26 1145 0.4522 0.6015
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
E8V3F0 CBM13 16 623 30 629 0.5641 0.6157
A0A402D1M8 CBM13 16 453 35 563 0.5424 0.8138
G8NPA5 CBM13 17 453 31 566 0.5369 0.8106
S0EV13 CBM96 16 589 28 894 0.5023 0.6935
A0A7H8PZ23 CBM32 16 452 45 569 0.4933 0.7795
A0A385SKX5 CBM32 17 622 20 674 0.486 0.6481
WJK48174.1 CBM32 17 608 20 949 0.4819 0.6798
A0A3S6ZB64 GT39 16 451 461 861 0.4434 0.7818
G8TS89 GT39 16 453 481 881 0.4411 0.785
A0A518DPD7 GH5 15 615 370 750 0.424 0.7418
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4imm-assembly2.cif.gz_B 35 611 1 322 0.6662 0.8854
4imm-assembly1.cif.gz_A 35 448 1 331 0.6577 0.8657
7tsz-assembly1.cif.gz_B 35 446 9 332 0.6566 0.8831
3q7o-assembly1.cif.gz_A 35 448 19 364 0.6501 0.8676
5ams-assembly2.cif.gz_B 37 450 1 379 0.6395 0.8026
4zoy-assembly1.cif.gz_A 37 455 1 406 0.6286 0.7686
4zoz-assembly2.cif.gz_B 37 448 1 394 0.6269 0.7759
4o9d-assembly2.cif.gz_A 30 450 3 382 0.6258 0.7973
5mzh-assembly2.cif.gz_B 13 453 16 415 0.6245 0.7825
8ipd-assembly1.cif.gz_W 30 448 1 388 0.624 0.7762
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5E769-F1-model_v4 35 449 37 385 0.6334 0.865
AF-Q8EC35-F1-model_v4 35 449 38 395 0.6284 0.8499
AF-Q3Y8L7-F1-model_v4 12 579 6 446 0.6199 0.7378
AF-O13982-F1-model_v4 40 450 51 399 0.6172 0.8606
AF-Q9HXJ7-F1-model_v4 35 449 36 380 0.6163 0.845
AF-P35184-F1-model_v4 11 451 1 431 0.6047 0.7218
AF-P38539-F1-model_v4 15 448 3 573 0.5738 0.7866
AF-Q9D0R9-F1-model_v4 30 452 4 353 0.5693 0.7754
AF-P39706-F1-model_v4 30 617 11 412 0.5676 0.7191
AF-Q7ZXK9-F1-model_v4 28 448 87 476 0.5664 0.7819
Download Full SwissProt Results