PROTEIN: HRGMv2_2452_40_12
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Protein File & Metadata
Source:
HRGMv2_2452_40_12.pdb
Genome ID:
Protein ID:
HRGMv2_2452_40_12
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Protein Sequence
MRKKIVSVVL CSIMTAALAL TGCGKSSSSS SKSSEKTTAE ESSSSSNSKY KKEITVDVFD 60 AMANYQGVQS GWFAKVVKDK FNMKLNIIAP NVAGGGDTLF QTRSTAGNLG DLVIIGTENG 120 KLKDTVKAGL LKDMSKLLKG KDVMKNYKMA ITKTNELTGK KGVYALPSEI SNQSPNASAD 180 GIEPLVENYV RWDAYKKAGY PTINTLDDLI PVLKKMQSNT PKSDSGKKTY AISLFKDWDG 240 ETMMAASNYA SLYGYKNTGF VFSKADGSEH QDATDSNGIY VKALKFLFEA NKAGLIDPES 300 TTQNYDMLSD KYRDGQILTS LWSYQGSSLY NTTEHKDAGK GFMPATIKDS TPYTSGCYSE 360 GNSKTIIAIG SKAKDPQRLA DFIDWMYSPE GMECVGQANG AAGPEGLTWE KKDGKAVYTS 420 FGDKALPSND VKVDSKWGGG SWKDGICTLN FKPLCLTDTD PNTKEPYMAT MWDYALKKNN 480 TKLDKDWQSK SNGAKTTIEN LQKNKQLAVG TGTSYTQPEE SSDISTLRNQ CKSTIVDSSW 540 KMIFAKDEAE FNSILKDMQK TVKGLGYAKV LKVDMKNAKD KAASAKQALK DYNAQKKSK 599
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 12 | 584 | 12 | 502 | 0.6559 |
0.7447 |
| AF-Q8DRJ6-F1-model_v4 | 51 | 590 | 59 | 514 | 0.559 |
0.6843 |
| AF-K0F002-F1-model_v4 | 52 | 574 | 46 | 439 | 0.5462 |
0.704 |
| AF-A0A132Z3C8-F1-model_v4 | 51 | 573 | 29 | 428 | 0.5407 |
0.6813 |
| AF-K0F1Y0-F1-model_v4 | 54 | 574 | 52 | 433 | 0.5264 |
0.6919 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 48 | 587 | 42 | 506 | 0.6352 |
0.7595 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 48 | 587 | 42 | 506 | 0.6352 |
0.7595 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xs8-assembly1.cif.gz_A | 53 | 583 | 1 | 474 | 0.7144 |
0.8125 |
| 5g62-assembly2.cif.gz_B | 54 | 590 | 1 | 491 | 0.7075 |
0.7935 |
| 6fth-assembly1.cif.gz_A | 50 | 587 | 1 | 496 | 0.7061 |
0.7876 |
| 3omb-assembly1.cif.gz_A | 48 | 587 | 3 | 503 | 0.7057 |
0.7847 |
| 5g5y-assembly1.cif.gz_A | 48 | 591 | 1 | 494 | 0.6948 |
0.7783 |
| 4tqu-assembly1.cif.gz_Q | 44 | 590 | 1 | 492 | 0.6935 |
0.7786 |
| 5h6u-assembly1.cif.gz_A | 45 | 587 | 1 | 487 | 0.6932 |
0.7809 |
| 3vlw-assembly2.cif.gz_B | 45 | 587 | 1 | 489 | 0.6925 |
0.7789 |
| 6jhx-assembly2.cif.gz_B | 44 | 587 | 1 | 483 | 0.6908 |
0.7807 |
| 5swa-assembly1.cif.gz_A | 54 | 587 | 1 | 448 | 0.6034 |
0.7066 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 47 | 591 | 41 | 538 | 0.6797 |
0.7858 |
| AF-P37966-F1-model_v4 | 49 | 583 | 31 | 502 | 0.6599 |
0.7747 |
| AF-Q795R2-F1-model_v4 | 48 | 584 | 38 | 498 | 0.634 |
0.7575 |
| AF-D4GP35-F1-model_v4 | 12 | 573 | 13 | 459 | 0.5744 |
0.681 |
| AF-Q7LYW7-F1-model_v4 | 47 | 576 | 38 | 450 | 0.5596 |
0.7026 |
| AF-O58758-F1-model_v4 | 48 | 576 | 41 | 420 | 0.5501 |
0.7158 |
| AF-O58969-F1-model_v4 | 49 | 586 | 36 | 441 | 0.5452 |
0.6878 |
| AF-P94528-F1-model_v4 | 50 | 573 | 30 | 433 | 0.5438 |
0.6835 |
| AF-O34335-F1-model_v4 | 16 | 574 | 21 | 417 | 0.5437 |
0.6874 |
| AF-Q9K491-F1-model_v4 | 47 | 573 | 33 | 422 | 0.5338 |
0.6849 |