PROTEIN: HRGMv2_2448_8_76
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Protein File & Metadata
Source:
HRGMv2_2448_8_76.pdb
Genome ID:
Protein ID:
HRGMv2_2448_8_76
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Protein Sequence
MSIVERRKKS IRNRLTIDFG IILIGICVFN YLLVSYIYKD RLYRQEQDKT DIVANAAITQ 60 TELIIQDSRN IISNISRIKF LKDYEQSVKE KTDKLEDYVS LFFDIGIVGV DGQGISVGGE 120 SFNVAGNHLF EDALQGKYNT FDLRRYEGEY YLVFLSPIKG EDENIQAVMI GVRRAEDFFD 180 QIMQVSSGQL CFLGNRSGDG VVVTKGSSDI NTVELLTDNE GIKNIFEKDL LFGKEYNYSI 240 ANEYTNTVFN FNYEMISDSE WLIGVVNTKG KIDVGLKTFN IAMLIGMITA IVIGLIIVYL 300 IASSIAKRMQ HIVSHLEETI KSEFKESVPT ELLENEDEIG SIAREMKHLE DKMAEMLISI 360 KESINYLNDR LSSVSQEKEK RDDEALS 387
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GQ03-F1-model_v4 | 6 | 386 | 6 | 471 | 0.6475 |
0.7613 |
| AF-Q0PBZ3-F1-model_v4 | 7 | 387 | 1 | 443 | 0.6345 |
0.8189 |
| AF-Q9HW93-F1-model_v4 | 6 | 387 | 2 | 388 | 0.6286 |
0.7982 |
| AF-Q0PBP3-F1-model_v4 | 2 | 387 | 3 | 461 | 0.6185 |
0.7924 |
| AF-Q0P864-F1-model_v4 | 1 | 387 | 3 | 446 | 0.614 |
0.7827 |
| AF-Q8DQN7-F1-model_v4 | 6 | 387 | 1 | 468 | 0.605 |
0.7387 |
| AF-O24925-F1-model_v4 | 6 | 387 | 2 | 471 | 0.5977 |
0.7775 |
| AF-Q9HVF8-F1-model_v4 | 2 | 387 | 4 | 454 | 0.5938 |
0.778 |
| AF-G3XD24-F1-model_v4 | 6 | 386 | 2 | 381 | 0.5927 |
0.7553 |
| AF-Q9HW91-F1-model_v4 | 6 | 386 | 2 | 381 | 0.5917 |
0.7546 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UQZ87596.1 | GH43 | 6 | 366 | 1 | 398 | 0.6071 |
0.697 |
| A0A0K2F936 | GT5 | 6 | 387 | 1 | 272 | 0.5001 |
0.7665 |
| A0A093XUT4 | GH3 | 1 | 325 | 1082 | 1517 | 0.3764 |
0.752 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UQZ87596.1 | GH43 | 6 | 366 | 1 | 398 | 0.6071 |
0.697 |
| A0A0K2F936 | GT5 | 6 | 387 | 1 | 272 | 0.5001 |
0.7665 |
| A0A093XUT4 | GH3 | 1 | 325 | 1082 | 1517 | 0.3764 |
0.752 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3lif-assembly2.cif.gz_B | 39 | 274 | 1 | 239 | 0.6069 |
0.7764 |
| 5ltv-assembly1.cif.gz_A | 43 | 268 | 1 | 215 | 0.6068 |
0.7933 |
| 6py5-assembly1.cif.gz_A | 42 | 271 | 1 | 227 | 0.6037 |
0.7754 |
| 5avf-assembly1.cif.gz_A | 36 | 279 | 5 | 244 | 0.603 |
0.7654 |
| 3c8c-assembly1.cif.gz_B | 40 | 282 | 1 | 239 | 0.6023 |
0.7604 |
| 6pxy-assembly1.cif.gz_A | 44 | 275 | 1 | 225 | 0.6012 |
0.7747 |
| 6py3-assembly2.cif.gz_B | 35 | 279 | 2 | 238 | 0.5995 |
0.7605 |
| 6py4-assembly1.cif.gz_A | 38 | 275 | 1 | 232 | 0.5991 |
0.764 |
| 5lt9-assembly1.cif.gz_A | 40 | 279 | 1 | 234 | 0.5957 |
0.7568 |
| 5ltx-assembly2.cif.gz_B | 40 | 276 | 1 | 235 | 0.5957 |
0.7568 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q88N45-F1-model_v4 | 1 | 387 | 1 | 376 | 0.6598 |
0.8441 |
| AF-Q9HW93-F1-model_v4 | 6 | 387 | 2 | 388 | 0.6286 |
0.7982 |
| AF-P39214-F1-model_v4 | 9 | 387 | 11 | 384 | 0.6097 |
0.8017 |
| AF-Q8CU03-F1-model_v4 | 2 | 387 | 1 | 382 | 0.6048 |
0.708 |
| AF-P19485-F1-model_v4 | 6 | 387 | 26 | 642 | 0.6002 |
0.775 |
| AF-Q8NYJ8-F1-model_v4 | 2 | 387 | 1 | 382 | 0.5963 |
0.7018 |
| AF-Q6HNQ4-F1-model_v4 | 9 | 387 | 9 | 383 | 0.5946 |
0.7786 |
| AF-G3XD24-F1-model_v4 | 6 | 386 | 2 | 381 | 0.5927 |
0.7553 |
| AF-Q9HW91-F1-model_v4 | 6 | 386 | 2 | 381 | 0.5917 |
0.7546 |
| AF-Q5HKE1-F1-model_v4 | 3 | 387 | 1 | 331 | 0.5893 |
0.7857 |