PROTEIN: HRGMv2_2448_8_36
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Protein File & Metadata
Source:
HRGMv2_2448_8_36.pdb
Genome ID:
Protein ID:
HRGMv2_2448_8_36
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Protein Sequence
MNLYKDKLLI VTYTAYIEFV ARTSSIKLQG DILPKDFDSS MIGFWHGDSF TMNLLLRELR 60 HYNHNISVVV TQDKRGDYIH GVLTTYHTKT LRIPDGAAIR PFLATLKETS QLGNETICIA 120 LDGPLGPYKE PKKLLFMLSE HAKKPCILLN VNYSKAIKLS KRWDYYTIVL PFSKITFTAH 180 HLGITQQEDL KQFKLYKQFI HSKSQCS 207
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0PB56-F1-model_v4 | 1 | 207 | 2 | 204 | 0.8559 |
0.8998 |
| AF-O25048-F1-model_v4 | 52 | 207 | 1 | 152 | 0.7274 |
0.8879 |
| AF-A0A3P7FL30-F1-model_v4 | 14 | 207 | 16 | 208 | 0.6779 |
0.7652 |
| AF-A0A133CQL3-F1-model_v4 | 13 | 207 | 10 | 192 | 0.6674 |
0.7803 |
| AF-A0A044SCM5-F1-model_v4 | 7 | 207 | 10 | 225 | 0.6633 |
0.7507 |
| AF-Q2FXJ7-F1-model_v4 | 15 | 207 | 8 | 198 | 0.6511 |
0.7313 |
| AF-K0EMF3-F1-model_v4 | 11 | 207 | 8 | 202 | 0.6363 |
0.7586 |
| AF-X8FBG4-F1-model_v4 | 8 | 207 | 6 | 231 | 0.6339 |
0.7314 |
| AF-K0EQL3-F1-model_v4 | 14 | 207 | 12 | 203 | 0.6278 |
0.7574 |
| AF-Q93841-F1-model_v4 | 7 | 207 | 32 | 253 | 0.6248 |
0.7421 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0G3WHV4-F1-model_v4 | GT9 | 3 | 207 | 1 | 198 | 0.5867 |
0.9021 |
| AF-A0A5C1YRX8-F1-model_v4 | GT30 | 1 | 207 | 6 | 224 | 0.5779 |
0.8896 |
| AF-A0A1U9LC73-F1-model_v4 | GT30 | 1 | 207 | 8 | 228 | 0.5742 |
0.8883 |
| AF-V5SE44-F1-model_v4 | GT30 | 1 | 207 | 7 | 220 | 0.5727 |
0.8872 |
| AF-B5ZJQ0-F1-model_v4 | GT30 | 1 | 207 | 7 | 223 | 0.572 |
0.8805 |
| AF-A0A5B9GI83-F1-model_v4 | GT30 | 1 | 207 | 9 | 233 | 0.5702 |
0.8837 |
| AF-A0A2Z5ZD47-F1-model_v4 | GT30 | 1 | 207 | 7 | 225 | 0.569 |
0.8807 |
| AF-D8JT65-F1-model_v4 | GT30 | 1 | 207 | 2 | 217 | 0.5689 |
0.8789 |
| AF-A0A291PJ56-F1-model_v4 | GT30 | 1 | 207 | 7 | 228 | 0.568 |
0.8804 |
| AF-A0A0A8K0Z3-F1-model_v4 | GT30 | 1 | 207 | 7 | 221 | 0.5674 |
0.8768 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0G3WHV4 | GT9 | 3 | 207 | 1 | 198 | 0.5867 |
0.9021 |
| B5ZJQ0 | GT30 | 1 | 207 | 7 | 223 | 0.572 |
0.8805 |
| E3HZ07 | GT30 | 1 | 207 | 21 | 234 | 0.5661 |
0.8828 |
| A0A6P1QA20 | GT30 | 1 | 207 | 9 | 233 | 0.5656 |
0.8765 |
| UYH52059.1 | GT30 | 1 | 207 | 1 | 219 | 0.5631 |
0.8655 |
| A0A6S6PJE3 | GT30 | 1 | 207 | 15 | 235 | 0.5619 |
0.88 |
| A0A1U9KN99 | GT30 | 2 | 207 | 24 | 237 | 0.5607 |
0.8708 |
| N0B9S3 | GT30 | 1 | 207 | 23 | 239 | 0.5601 |
0.8723 |
| A0A6N0DWK2 | GT30 | 1 | 207 | 7 | 221 | 0.556 |
0.8599 |
| A0A4Y6UKR0 | GT30 | 4 | 207 | 1 | 206 | 0.5529 |
0.8524 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9ZE57-F1-model_v4 | 1 | 207 | 11 | 216 | 0.8498 |
0.8971 |
| AF-O07584-F1-model_v4 | 15 | 207 | 8 | 196 | 0.6565 |
0.7365 |
| AF-Q93841-F1-model_v4 | 7 | 207 | 32 | 253 | 0.6248 |
0.7421 |
| AF-P26647-F1-model_v4 | 8 | 207 | 8 | 228 | 0.618 |
0.7187 |
| AF-Q59188-F1-model_v4 | 10 | 207 | 18 | 248 | 0.6178 |
0.7274 |
| AF-P75479-F1-model_v4 | 7 | 207 | 32 | 260 | 0.6173 |
0.7358 |
| AF-Q9JU41-F1-model_v4 | 11 | 207 | 18 | 250 | 0.6167 |
0.7377 |
| AF-Q9JZ47-F1-model_v4 | 11 | 207 | 18 | 250 | 0.6163 |
0.7375 |
| AF-P0A257-F1-model_v4 | 8 | 207 | 8 | 228 | 0.6162 |
0.7169 |
| AF-P0A258-F1-model_v4 | 7 | 207 | 11 | 228 | 0.6161 |
0.7141 |