PROTEIN: HRGMv2_2445_2_127
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Protein File & Metadata
Source:
HRGMv2_2445_2_127.pdb
Genome ID:
Protein ID:
HRGMv2_2445_2_127
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Protein Sequence
MKILIAGSVI GSEGYEEWAL VKALENELKK EHEVDTFLLP FSRNFLTLPD QILAYRLLDV 60 HSCDMLITVG YPACMLEHNN KISYLFDIVP HYWEYWDSEF GILCNNQYLN IRDTIHKIDT 120 EVLSSAKKIV CNSQILSEDL SARIGIKAET LYCPILDYEN NNIEKLTGEK YIMSETNLLP 180 FQRPELLIQL MTKLKDIKLK VFIPDTDIVY KETFEKWILE DGLENKIKII YSKASIEDYK 240 NSLAYIVTDY KMRRISNGII KGMGNGIPII YMEDCGGSAE LLNSYDNRKC VDINEYNLIT 300 DKLIFGLKRN KNAYRPNELG IFAERLILL 329
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P9C7-F1-model_v4 | 1 | 329 | 2 | 362 | 0.7831 |
0.8411 |
| AF-E7EZN0-F1-model_v4 | 1 | 329 | 1 | 338 | 0.7625 |
0.7985 |
| AF-A0A0H3H044-F1-model_v4 | 1 | 329 | 1 | 361 | 0.7599 |
0.8176 |
| AF-Q5F602-F1-model_v4 | 1 | 329 | 1 | 376 | 0.7568 |
0.8245 |
| AF-Q9I3V9-F1-model_v4 | 1 | 329 | 1 | 373 | 0.7564 |
0.8225 |
| AF-A4FUP9-F1-model_v4 | 2 | 329 | 1 | 336 | 0.7542 |
0.7958 |
| AF-Q96MS3-F1-model_v4 | 2 | 329 | 1 | 336 | 0.7525 |
0.7941 |
| AF-D3ZUX2-F1-model_v4 | 2 | 329 | 1 | 336 | 0.7511 |
0.793 |
| AF-O05083-F1-model_v4 | 1 | 329 | 2 | 352 | 0.7491 |
0.7932 |
| AF-A0A077Z0B1-F1-model_v4 | 1 | 329 | 1 | 410 | 0.7481 |
0.8477 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A5FV86-F1-model_v4 | GT4 | 1 | 328 | 1 | 345 | 0.8733 |
0.9117 |
| AF-F0J2M9-F1-model_v4 | GT4 | 1 | 328 | 1 | 345 | 0.8718 |
0.9104 |
| AF-A0A410UL70-F1-model_v4 | GT4 | 1 | 328 | 1 | 343 | 0.864 |
0.9006 |
| AXI39401.1 | GT4 | 1 | 328 | 2 | 346 | 0.8629 |
0.9032 |
| AF-A0A2R2WCC0-F1-model_v4 | GT4 | 1 | 328 | 1 | 345 | 0.8629 |
0.9024 |
| AF-H0Q0U3-F1-model_v4 | GT4 | 1 | 328 | 1 | 345 | 0.8622 |
0.9018 |
| AF-A0A517QWP5-F1-model_v4 | GT4 | 1 | 328 | 1 | 345 | 0.8613 |
0.9008 |
| AF-A0A6G8NMJ3-F1-model_v4 | GT4 | 1 | 328 | 1 | 345 | 0.8601 |
0.8997 |
| AF-A0A7H1AN33-F1-model_v4 | GT4 | 1 | 328 | 1 | 345 | 0.8598 |
0.8997 |
| A0A2U1RC93 | GT4 | 1 | 328 | 1 | 345 | 0.8593 |
0.8988 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AXI39401.1 | GT4 | 1 | 328 | 2 | 346 | 0.8629 |
0.9032 |
| A0A2R2WCC0 | GT4 | 1 | 328 | 1 | 345 | 0.8629 |
0.9024 |
| A0A7H1AN33 | GT4 | 1 | 328 | 1 | 345 | 0.8598 |
0.8997 |
| A0A2U1RC93 | GT4 | 1 | 328 | 1 | 345 | 0.8593 |
0.8988 |
| D4Z5H5 | GT4 | 1 | 328 | 1 | 345 | 0.8589 |
0.899 |
| UQZ91442.1 | GT4 | 1 | 329 | 1 | 349 | 0.8547 |
0.8967 |
| D4Z5H6 | GT4 | 1 | 329 | 1 | 347 | 0.8538 |
0.8944 |
| A0A0S3PNS0 | GT4 | 1 | 328 | 1 | 345 | 0.8538 |
0.8944 |
| A0A2R4GZ44 | GT4 | 1 | 328 | 1 | 346 | 0.851 |
0.8924 |
| A7NMQ2 | GT4 | 1 | 329 | 3 | 346 | 0.8503 |
0.8877 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5d01-assembly1.cif.gz_B | 1 | 329 | 3 | 355 | 0.7557 |
0.8057 |
| 5d00-assembly1.cif.gz_B | 1 | 329 | 3 | 356 | 0.7543 |
0.8053 |
| 2jjm-assembly1.cif.gz_B | 1 | 329 | 2 | 354 | 0.7539 |
0.8025 |
| 8b5s-assembly1.cif.gz_A | 1 | 329 | 1 | 363 | 0.7504 |
0.8057 |
| 5d01-assembly1.cif.gz_A | 1 | 329 | 3 | 352 | 0.7502 |
0.7973 |
| 8b63-assembly1.cif.gz_A | 1 | 329 | 1 | 365 | 0.7494 |
0.8072 |
| 2iw1-assembly1.cif.gz_A | 2 | 329 | 1 | 369 | 0.7492 |
0.8149 |
| 5d00-assembly1.cif.gz_A | 1 | 329 | 3 | 355 | 0.7483 |
0.7988 |
| 8b62-assembly2.cif.gz_B | 1 | 329 | 1 | 362 | 0.7447 |
0.7995 |
| 4xsu-assembly1.cif.gz_B | 1 | 329 | 2 | 363 | 0.744 |
0.8002 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P9C7-F1-model_v4 | 1 | 329 | 2 | 362 | 0.7831 |
0.8411 |
| AF-P54490-F1-model_v4 | 1 | 329 | 1 | 348 | 0.764 |
0.8179 |
| AF-A4FUP9-F1-model_v4 | 2 | 329 | 1 | 336 | 0.7542 |
0.7958 |
| AF-Q96MS3-F1-model_v4 | 2 | 329 | 1 | 336 | 0.7525 |
0.7941 |
| AF-Q5RAF1-F1-model_v4 | 2 | 329 | 1 | 336 | 0.752 |
0.7937 |
| AF-O05083-F1-model_v4 | 1 | 329 | 2 | 352 | 0.7491 |
0.7932 |
| AF-Q48454-F1-model_v4 | 1 | 329 | 1 | 370 | 0.7472 |
0.8104 |
| AF-P0DMP6-F1-model_v4 | 1 | 329 | 1 | 338 | 0.7448 |
0.7753 |
| AF-P0DMP7-F1-model_v4 | 1 | 329 | 1 | 338 | 0.7443 |
0.775 |
| AF-Q4JAK2-F1-model_v4 | 1 | 329 | 2 | 347 | 0.7442 |
0.7862 |