PROTEIN: HRGMv2_2437_12_41
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Protein File & Metadata
Source:
HRGMv2_2437_12_41.pdb
Genome ID:
Protein ID:
HRGMv2_2437_12_41
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Protein Sequence
MLNEWKYYNH ALIPTTPPHI DVKLPQGNFW KALNNGGGRK ALFARWTSDF DCGYETSWWY 60 VIKDDKFDIS TLKAKRRYEI NKGKKNFDVR IINPLEYIDD LLEVYIQAIS SWPEKYRPKI 120 DKEIFKKQIH TWNKDIIYGG FDKENNKLCG YAYLIENMEY LEFSMLRVNP NSEKKGINAA 180 MVVAILEDNN YRLNKKFYIN DGSRSIRHET AFQDYLEKYF GFRKAYCKLH IKYRFPVDLI 240 VKILYPFRDK ISKENKIGSL ICGVLKMEEI KRTC 274
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I0M0-F1-model_v4 | 1 | 229 | 5 | 229 | 0.6012 |
0.6954 |
| AF-Q8DQR1-F1-model_v4 | 1 | 259 | 44 | 404 | 0.5804 |
0.7415 |
| AF-K0EML1-F1-model_v4 | 1 | 236 | 55 | 314 | 0.5715 |
0.72 |
| AF-Q9HZ10-F1-model_v4 | 1 | 274 | 63 | 359 | 0.5689 |
0.6732 |
| AF-K0F7Q2-F1-model_v4 | 1 | 257 | 45 | 284 | 0.5635 |
0.672 |
| AF-A0A1D6J7B6-F1-model_v4 | 1 | 274 | 60 | 368 | 0.5619 |
0.6785 |
| AF-Q2FVZ4-F1-model_v4 | 1 | 258 | 44 | 414 | 0.5579 |
0.7261 |
| AF-Q8ZMM6-F1-model_v4 | 1 | 232 | 54 | 298 | 0.5525 |
0.6914 |
| AF-Q2FVX2-F1-model_v4 | 1 | 257 | 18 | 251 | 0.5445 |
0.6348 |
| AF-Q2FVL5-F1-model_v4 | 1 | 260 | 6 | 416 | 0.5393 |
0.6959 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0B6TIX1-F1-model_v4 | GT4 | 1 | 272 | 454 | 747 | 0.4624 |
0.69 |
| A0R4V1 | GT2 | 1 | 264 | 359 | 695 | 0.4616 |
0.6907 |
| AF-A0A1Y0CB11-F1-model_v4 | GT4 | 1 | 263 | 456 | 762 | 0.4603 |
0.7102 |
| AF-A0A6B8WQJ8-F1-model_v4 | GT4 | 1 | 274 | 455 | 747 | 0.4592 |
0.6811 |
| AF-A0A5K7YHP0-F1-model_v4 | GT4 | 1 | 269 | 409 | 710 | 0.4588 |
0.6801 |
| AF-Q2IPR1-F1-model_v4 | GT4 | 1 | 264 | 406 | 685 | 0.4532 |
0.6769 |
| AF-Q5KSB3-F1-model_v4 | GT4 | 1 | 259 | 446 | 735 | 0.4528 |
0.7013 |
| AF-A0A6B8VZR8-F1-model_v4 | GT4 | 1 | 259 | 469 | 757 | 0.4526 |
0.7085 |
| AF-A4Q9U6-F1-model_v4 | GT4 | 1 | 259 | 446 | 734 | 0.4521 |
0.7002 |
| A0A0F6WPF6 | GT4 | 1 | 259 | 446 | 734 | 0.451 |
0.6971 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0R4V1 | GT2 | 1 | 264 | 359 | 695 | 0.4616 |
0.6907 |
| A0A1Y0CB11 | GT4 | 1 | 263 | 456 | 762 | 0.4603 |
0.7102 |
| A0A5K7YHP0 | GT4 | 1 | 269 | 409 | 710 | 0.4588 |
0.6801 |
| A0A0F6WPF6 | GT4 | 1 | 259 | 446 | 734 | 0.451 |
0.6971 |
| A0A6H1RBS1 | GT1 | 1 | 260 | 382 | 652 | 0.4478 |
0.6751 |
| A0A4U1HM25 | GT4 | 1 | 256 | 413 | 698 | 0.4426 |
0.6806 |
| B8JF70 | GT4 | 1 | 260 | 407 | 689 | 0.4363 |
0.6604 |
| BDG08718.1 | GT4 | 1 | 236 | 457 | 726 | 0.4322 |
0.7285 |
| WIM71735.1 | GT4 | 1 | 249 | 445 | 738 | 0.4145 |
0.6754 |
| A0A7H8QUW2 | GH3 | 1 | 260 | 610 | 946 | 0.3591 |
0.5876 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6lv0-assembly2.cif.gz_B | 1 | 260 | 32 | 316 | 0.6099 |
0.7084 |
| 5vrv-assembly2.cif.gz_D | 1 | 263 | 33 | 305 | 0.6064 |
0.6924 |
| 5vrv-assembly3.cif.gz_E | 1 | 263 | 33 | 304 | 0.6047 |
0.6916 |
| 4v36-assembly2.cif.gz_B | 1 | 264 | 40 | 309 | 0.6042 |
0.687 |
| 5vrv-assembly1.cif.gz_A | 1 | 263 | 33 | 307 | 0.6022 |
0.6918 |
| 4v36-assembly1.cif.gz_A | 1 | 264 | 40 | 318 | 0.5956 |
0.6871 |
| 4v35-assembly1.cif.gz_A | 1 | 264 | 40 | 318 | 0.5891 |
0.6768 |
| 1xix-assembly1.cif.gz_A | 1 | 265 | 45 | 335 | 0.589 |
0.6891 |
| 1xe4-assembly1.cif.gz_A | 1 | 265 | 45 | 335 | 0.5881 |
0.6885 |
| 1xf8-assembly1.cif.gz_A | 1 | 265 | 45 | 335 | 0.5873 |
0.6876 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B1JBE6-F1-model_v4 | 1 | 229 | 5 | 229 | 0.6036 |
0.6978 |
| AF-Q2SJK9-F1-model_v4 | 1 | 229 | 5 | 229 | 0.6032 |
0.6958 |
| AF-A5W1H0-F1-model_v4 | 1 | 229 | 5 | 229 | 0.6031 |
0.6973 |
| AF-B0KLX4-F1-model_v4 | 1 | 229 | 5 | 229 | 0.603 |
0.6972 |
| AF-Q88FS6-F1-model_v4 | 1 | 229 | 5 | 229 | 0.6028 |
0.6969 |
| AF-Q21K29-F1-model_v4 | 1 | 229 | 3 | 230 | 0.6027 |
0.6896 |
| AF-A4XUY1-F1-model_v4 | 1 | 229 | 5 | 229 | 0.6023 |
0.6964 |
| AF-Q02NB0-F1-model_v4 | 1 | 229 | 5 | 229 | 0.6022 |
0.6964 |
| AF-Q1IBD6-F1-model_v4 | 1 | 229 | 5 | 229 | 0.6021 |
0.6964 |
| AF-C3JY60-F1-model_v4 | 1 | 229 | 5 | 229 | 0.6018 |
0.6959 |