PROTEIN: HRGMv2_2417_34_2
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Protein File & Metadata
Source:
HRGMv2_2417_34_2.pdb
Genome ID:
Protein ID:
HRGMv2_2417_34_2
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Protein Sequence
MKKKVVAMLL AGIMAAGALA GCGGSSDSGQ GGSGSTEEGK VINIYTWNDE FRTRVEAVYP 60 EVEETSADGT VTTLKDGTEI HWIVNPNQDG VYQQKLDEAL MNQADAAADD KVDIFLSETD 120 YVYKYTDAEA DVAMPLTDLG IDPEKDLADQ YEFTKVTASD QDGVQRGSTW QCCPGLLVYR 180 RDIAKDVFGT DDPAAVGEKV KDWDTLKTTA EELKAKGYYT FSSYADTFRL YGNSISQPWV 240 AEGETTLKVD PQIMEWVETS KEWLDAGYYD KTVKGQFNDD WNKAMGSASK VFAFLLPPWG 300 IDFTLSPNWD GEAGAWAVTN PPQEYNWGGS YIHACTGTDN PEHVKEIILA ISADKDNLLQ 360 ISKDYLDFTN TKSGMSEAAE DDANFSSEFL GGQNAYKYYV PVAENIEIAP LSAYDQGCVE 420 LIQNAFSDYF QGNVDFERAK ENFETAIKER YPDITEIQWP E 461
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F002-F1-model_v4 | 35 | 454 | 43 | 439 | 0.7242 |
0.8316 |
| AF-K0F1Y0-F1-model_v4 | 23 | 454 | 32 | 433 | 0.7209 |
0.8138 |
| AF-K0EWS5-F1-model_v4 | 36 | 460 | 24 | 457 | 0.7114 |
0.7834 |
| AF-A0A133CPC5-F1-model_v4 | 35 | 455 | 31 | 423 | 0.705 |
0.8048 |
| AF-K0EWS9-F1-model_v4 | 33 | 455 | 45 | 463 | 0.7041 |
0.7903 |
| AF-K0F8J3-F1-model_v4 | 38 | 455 | 29 | 436 | 0.7004 |
0.7847 |
| AF-Q8DNN7-F1-model_v4 | 38 | 455 | 33 | 434 | 0.6991 |
0.7936 |
| AF-O53485-F1-model_v4 | 39 | 455 | 35 | 439 | 0.6969 |
0.7879 |
| AF-Q9CBN6-F1-model_v4 | 37 | 453 | 37 | 446 | 0.6963 |
0.784 |
| AF-A0A0H3GKJ8-F1-model_v4 | 34 | 455 | 23 | 407 | 0.6944 |
0.7975 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 35 | 455 | 467 | 866 | 0.5387 |
0.8042 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 37 | 452 | 1 | 393 | 0.8212 |
0.8996 |
| 3uor-assembly2.cif.gz_B | 40 | 456 | 1 | 389 | 0.7604 |
0.8457 |
| 6x84-assembly2.cif.gz_B | 37 | 455 | 1 | 411 | 0.745 |
0.8073 |
| 8bfy-assembly1.cif.gz_A | 40 | 453 | 1 | 393 | 0.7407 |
0.82 |
| 4rk2-assembly1.cif.gz_A | 38 | 452 | 1 | 393 | 0.7407 |
0.8171 |
| 7vfq-assembly2.cif.gz_B | 39 | 459 | 1 | 396 | 0.7399 |
0.8146 |
| 7vfr-assembly1.cif.gz_A | 39 | 458 | 1 | 397 | 0.7396 |
0.8131 |
| 2z8d-assembly2.cif.gz_B | 34 | 458 | 1 | 399 | 0.7395 |
0.8117 |
| 7nbz-assembly1.cif.gz_A | 37 | 457 | 1 | 377 | 0.739 |
0.8292 |
| 7vfq-assembly4.cif.gz_D | 39 | 459 | 1 | 397 | 0.7387 |
0.8124 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P94528-F1-model_v4 | 38 | 453 | 32 | 433 | 0.7648 |
0.8605 |
| AF-P29822-F1-model_v4 | 37 | 453 | 26 | 422 | 0.7567 |
0.8524 |
| AF-Q9K491-F1-model_v4 | 24 | 454 | 14 | 424 | 0.7398 |
0.8119 |
| AF-Q9KEE7-F1-model_v4 | 11 | 455 | 25 | 445 | 0.7331 |
0.8034 |
| AF-Q8FVS7-F1-model_v4 | 37 | 455 | 23 | 411 | 0.7032 |
0.8009 |
| AF-Q578M8-F1-model_v4 | 37 | 455 | 23 | 411 | 0.7023 |
0.8 |
| AF-O07009-F1-model_v4 | 28 | 456 | 25 | 419 | 0.7014 |
0.797 |
| AF-Q2YKZ9-F1-model_v4 | 37 | 455 | 23 | 411 | 0.7008 |
0.7984 |
| AF-Q53684-F1-model_v4 | 25 | 454 | 16 | 423 | 0.7007 |
0.7965 |
| AF-Q00749-F1-model_v4 | 37 | 456 | 33 | 420 | 0.6909 |
0.7955 |