PROTEIN: HRGMv2_2412_12_71
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Protein File & Metadata
Source:
HRGMv2_2412_12_71.pdb
Genome ID:
Protein ID:
HRGMv2_2412_12_71
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Protein Sequence
MKKVSGKKAN LIFGLAMGIL LFLQLLCLFY YGSRKAGFHE DELYTYYSTN KTAGLFVNDR 60 QWMDRDELRN DFVVLPGEQF RYGVVKLMQS WDVHPPVYYY IFHTVCSLFP GVFSKWLGIS 120 VNLIAYIGSY LLLAYGVYLT VNQENEGAKK DKWGKILAFL TCFSWGFSAA VISGVMFIRM 180 YQWFTLFILL CTDLHLRAVA KGDFRIRSFF LPLGITVFLG FLTQYYYLIF HFFLGAGFCF 240 LLLKNKKRKE LLSYILTCAL GLGLAICYYP ASLSHIFRGY RGTEAVSEFS DASNTWGRLR 300 FFSGLFDDYV MNGTLSLWLL VICMAGVTTL YLRKRKKEKP GGFNAALGLL LFTCAGYFFT 360 ISKTALLLGE TSNRYQLPIY GILLFLILYG LWMSVLELLR QWGKGKADGS KGAVCALTAA 420 IILAVAVMNG AALKNEKVFF LYEEEKEIME FVEAHKQEPV VVFYNDASSD HVWWLSDELM 480 KYPRVYLASQ GNPEPVTDKT ITESKRLLVY VADYDGKEEE CLKGLLEGNS SLSTYEVVAQ 540 KGLWTLYEME 550
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CC27-F1-model_v4 | 2 | 550 | 17 | 526 | 0.7207 |
0.7755 |
| AF-O06152-F1-model_v4 | 1 | 550 | 43 | 555 | 0.71 |
0.7788 |
| AF-Q8ZP99-F1-model_v4 | 3 | 550 | 10 | 506 | 0.7079 |
0.7713 |
| AF-Q9HUZ2-F1-model_v4 | 9 | 550 | 4 | 474 | 0.7047 |
0.7818 |
| AF-A0A0R4IE52-F1-model_v4 | 2 | 550 | 1 | 492 | 0.6808 |
0.7415 |
| AF-G5EDN2-F1-model_v4 | 11 | 550 | 1 | 494 | 0.6645 |
0.7186 |
| AF-Q5AK24-F1-model_v4 | 5 | 550 | 1 | 482 | 0.654 |
0.7134 |
| AF-Q9HY61-F1-model_v4 | 9 | 550 | 1 | 545 | 0.6521 |
0.6804 |
| AF-P76473-F1-model_v4 | 8 | 550 | 1 | 548 | 0.651 |
0.6784 |
| AF-O52327-F1-model_v4 | 11 | 550 | 1 | 545 | 0.6507 |
0.6798 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BCY11543.1 | GT83 | 1 | 550 | 1 | 471 | 0.744 |
0.8217 |
| BCJ40713.1 | GT83 | 3 | 550 | 12 | 501 | 0.7403 |
0.809 |
| AF-A0A7I7Q4C4-F1-model_v4 | GT83 | 1 | 550 | 11 | 522 | 0.7402 |
0.7904 |
| AF-A0A3G8VNE0-F1-model_v4 | GT83 | 5 | 550 | 16 | 504 | 0.7395 |
0.8113 |
| AF-A0A2L0N2L3-F1-model_v4 | GT83 | 1 | 550 | 1 | 509 | 0.7375 |
0.7866 |
| AF-A0A7I7PDW5-F1-model_v4 | GT83 | 7 | 550 | 1 | 471 | 0.7374 |
0.811 |
| AF-A0A2H5AZW5-F1-model_v4 | GT83 | 9 | 550 | 1 | 470 | 0.7351 |
0.8095 |
| AF-A0A1B4Y458-F1-model_v4 | GT83 | 1 | 550 | 14 | 521 | 0.7349 |
0.7903 |
| AF-A0A1H1PH31-F1-model_v4 | GT83 | 4 | 550 | 13 | 523 | 0.7349 |
0.7892 |
| AF-A0A6H1BV23-F1-model_v4 | GT83 | 3 | 550 | 1 | 502 | 0.7348 |
0.785 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UCR88156.1 | GT83 | 2 | 550 | 3 | 496 | 0.7518 |
0.8131 |
| A0A3S9W690 | GT83 | 1 | 550 | 2 | 509 | 0.7453 |
0.793 |
| A0A543NUS7 | GT83 | 10 | 550 | 1 | 474 | 0.7444 |
0.8145 |
| BCY11543.1 | GT83 | 1 | 550 | 1 | 471 | 0.744 |
0.8217 |
| A0A7T4WKG0 | GT83 | 2 | 550 | 6 | 487 | 0.7437 |
0.813 |
| BCJ40713.1 | GT83 | 3 | 550 | 12 | 501 | 0.7403 |
0.809 |
| A0A1B1BQ47 | GT83 | 1 | 550 | 5 | 504 | 0.7396 |
0.7992 |
| A0A3G8VNE0 | GT83 | 5 | 550 | 16 | 504 | 0.7395 |
0.8113 |
| H6MRT8 | GT83 | 1 | 550 | 1 | 505 | 0.7392 |
0.7895 |
| CAD5989297.1 | GT83 | 1 | 550 | 1 | 564 | 0.7386 |
0.7648 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5f15-assembly1.cif.gz_A | 8 | 550 | 1 | 541 | 0.6433 |
0.6684 |
| 5ezm-assembly1.cif.gz_A | 8 | 550 | 1 | 537 | 0.6366 |
0.6639 |
| 6s7o-assembly1.cif.gz_A | 1 | 547 | 1 | 643 | 0.6085 |
0.6793 |
| 6c26-assembly1.cif.gz_A | 1 | 549 | 1 | 610 | 0.5979 |
0.6621 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67601-F1-model_v4 | 13 | 550 | 1 | 416 | 0.698 |
0.8079 |
| AF-O67270-F1-model_v4 | 11 | 550 | 1 | 496 | 0.6667 |
0.7194 |
| AF-Q23361-F1-model_v4 | 15 | 550 | 1 | 489 | 0.664 |
0.7226 |
| AF-Q7N3Q9-F1-model_v4 | 5 | 550 | 1 | 550 | 0.6599 |
0.6847 |
| AF-Q4ZSZ0-F1-model_v4 | 9 | 550 | 1 | 546 | 0.6587 |
0.6872 |
| AF-A8FRR0-F1-model_v4 | 9 | 550 | 3 | 542 | 0.658 |
0.6862 |
| AF-Q1MLH5-F1-model_v4 | 12 | 549 | 1 | 464 | 0.6577 |
0.7359 |
| AF-B4EUL1-F1-model_v4 | 9 | 550 | 4 | 548 | 0.6574 |
0.6837 |
| AF-B4ETL9-F1-model_v4 | 5 | 549 | 1 | 549 | 0.6556 |
0.6818 |
| AF-Q8ZDX9-F1-model_v4 | 5 | 550 | 1 | 551 | 0.6552 |
0.6809 |