PROTEIN: HRGMv2_2407_14_41
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2407_14_41.pdb
Genome ID:
Protein ID:
HRGMv2_2407_14_41
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNKLPVRIRL RDKEYAQKME EYLLGQYGER MEIGGEGSNS VVITDQAEDT EGSGILLNFD 60 NDMAEGVSAY QSMDEIARMV LKQGEGQGYA QTEEMPEKLE EAAGQYSNGQ PFPGLIGVFS 120 PVGGCGKTTF SIAYCEAAAQ KYPGKKILYW NAEGAADWQM FFWNPCPYTM SDLIYCLLMG 180 EENMQEYLRE IAVGQDDGTF FIKPCTSFQD LNVLEGEELN RLLKVLTTYF DLVICDMNTA 240 FENINRQILR LSQTRYYLVS DMPGGRLKLQ DFAENLQRQN LTAEYMEKGS TVVCIGDRGE 300 EWKLPEAWKG ADSVILPWCS RLFYEEGGRL RLRRDSNYYE RIRQLV 346
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q60283-F1-model_v4 | 113 | 346 | 1 | 251 | 0.6348 |
0.8128 |
| AF-O25098-F1-model_v4 | 112 | 346 | 1 | 240 | 0.6233 |
0.8082 |
| AF-Q57967-F1-model_v4 | 112 | 346 | 5 | 233 | 0.622 |
0.8198 |
| AF-A0A132P5S1-F1-model_v4 | 112 | 346 | 1 | 246 | 0.622 |
0.788 |
| AF-K0F3H1-F1-model_v4 | 105 | 346 | 26 | 287 | 0.6201 |
0.8164 |
| AF-Q5F5X8-F1-model_v4 | 112 | 346 | 2 | 247 | 0.6198 |
0.7878 |
| AF-O25759-F1-model_v4 | 112 | 346 | 2 | 258 | 0.6174 |
0.7953 |
| AF-A0A0H3GPZ8-F1-model_v4 | 112 | 346 | 1 | 246 | 0.6155 |
0.8013 |
| AF-O05853-F1-model_v4 | 112 | 346 | 3 | 246 | 0.615 |
0.7947 |
| AF-Q9HT11-F1-model_v4 | 112 | 346 | 1 | 246 | 0.6145 |
0.7884 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1U9NHZ6-F1-model_v4 | CBM48 | 113 | 346 | 1 | 248 | 0.5278 |
0.8219 |
| AF-A0A7T4YL43-F1-model_v4 | CBM48 | 113 | 346 | 1 | 247 | 0.5002 |
0.8207 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1U9NHZ6 | CBM48 | 113 | 346 | 1 | 248 | 0.5278 |
0.8219 |
| A0A7T4YL43 | CBM48 | 113 | 346 | 1 | 247 | 0.5002 |
0.8207 |
| A0A7G9NX83 | CBM48 | 112 | 346 | 36 | 291 | 0.4609 |
0.8233 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3ea0-assembly1.cif.gz_B | 110 | 346 | 1 | 238 | 0.6801 |
0.8306 |
| 3ea0-assembly1.cif.gz_A | 112 | 346 | 1 | 237 | 0.6797 |
0.8328 |
| 1hyq-assembly1.cif.gz_A | 113 | 346 | 1 | 228 | 0.6659 |
0.8253 |
| 4rz3-assembly1.cif.gz_B | 112 | 346 | 1 | 239 | 0.65 |
0.8044 |
| 7dut-assembly1.cif.gz_A | 114 | 346 | 1 | 215 | 0.6494 |
0.8255 |
| 5j1j-assembly1.cif.gz_B | 112 | 346 | 2 | 240 | 0.6474 |
0.8076 |
| 2bek-assembly2.cif.gz_D | 112 | 346 | 1 | 235 | 0.6389 |
0.7895 |
| 4rz2-assembly2.cif.gz_B | 112 | 346 | 1 | 239 | 0.6344 |
0.8043 |
| 4v03-assembly1.cif.gz_B | 113 | 346 | 1 | 225 | 0.6344 |
0.8024 |
| 2bej-assembly1.cif.gz_A | 112 | 346 | 1 | 235 | 0.6337 |
0.7865 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P70843-F1-model_v4 | 113 | 346 | 1 | 241 | 0.6523 |
0.8131 |
| AF-Q9Z7A1-F1-model_v4 | 113 | 346 | 1 | 245 | 0.6365 |
0.809 |
| AF-Q60283-F1-model_v4 | 113 | 346 | 1 | 251 | 0.6348 |
0.8128 |
| AF-O84586-F1-model_v4 | 113 | 346 | 1 | 245 | 0.6348 |
0.8067 |
| AF-P47706-F1-model_v4 | 114 | 346 | 1 | 258 | 0.6345 |
0.8285 |
| AF-Q72H90-F1-model_v4 | 110 | 346 | 3 | 239 | 0.6337 |
0.7868 |
| AF-Q9PJF8-F1-model_v4 | 113 | 346 | 1 | 245 | 0.633 |
0.8043 |
| AF-O83296-F1-model_v4 | 112 | 346 | 1 | 243 | 0.6313 |
0.7964 |
| AF-Q50314-F1-model_v4 | 114 | 346 | 1 | 259 | 0.6309 |
0.8252 |
| AF-Q9K5N0-F1-model_v4 | 112 | 346 | 1 | 246 | 0.6279 |
0.7922 |