PROTEIN: HRGMv2_2407_11_18
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Protein File & Metadata
Source:
HRGMv2_2407_11_18.pdb
Genome ID:
Protein ID:
HRGMv2_2407_11_18
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Protein Sequence
MYQDSEGKLW WKGNLHMHTT CSDGKKTPQE AMEIYQKAGY DFIALTDHWK PSSDGQYANM 60 LTLPGVELDT MQGGCWHIVG IGMEREIQAD RHMRGQELID AIRAAGGEPI LAHPAWSLDQ 120 PGDMAELTGL IGTEIYNSVS GYPYSARADS SHVLDLASKY GMRVPYMASD DTHYYAEELF 180 GGFIYVQAQE CSRNAILEAL RAGRFYATQG PRIYGAAIQD GYFTVRCSKA SAVIFYSASV 240 WQADTVCRGQ DVEEAKFRLK THDRFVRAQI IDADGKSAWT SAYTVGPENV I 291
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57860-F1-model_v4 | 11 | 281 | 1 | 211 | 0.634 |
0.796 |
| AF-A0A0D2GG65-F1-model_v4 | 6 | 286 | 174 | 485 | 0.6232 |
0.815 |
| AF-Q54IG4-F1-model_v4 | 1 | 274 | 119 | 356 | 0.477 |
0.7306 |
| AF-Q54B73-F1-model_v4 | 1 | 211 | 118 | 350 | 0.4702 |
0.814 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0B7GRQ1 | GH0 | 4 | 291 | 8 | 475 | 0.5789 |
0.8825 |
| AF-A0A0B7GRQ1-F1-model_v4 | GH0 | 4 | 291 | 8 | 475 | 0.5789 |
0.8825 |
| UQZ81097.1 | CBM32 , CBM6 | 6 | 287 | 636 | 961 | 0.5296 |
0.8443 |
| QYM64029.1 | GH38 | 1 | 275 | 65 | 946 | 0.4735 |
0.771 |
| AF-D3FAF3-F1-model_v4 | GT4 | 6 | 275 | 403 | 604 | 0.43 |
0.8361 |
| AF-B3DWM3-F1-model_v4 | GT28 | 6 | 274 | 395 | 631 | 0.4288 |
0.7215 |
| AF-A0A0C1UQM4-F1-model_v4 | GT28 | 6 | 273 | 393 | 630 | 0.4266 |
0.7146 |
| AF-A0A1H2ECD2-F1-model_v4 | GT28 | 7 | 228 | 480 | 718 | 0.4087 |
0.7641 |
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2anu-assembly1.cif.gz_B | 8 | 274 | 1 | 220 | 0.6584 |
0.7645 |
| 2anu-assembly1.cif.gz_C | 8 | 276 | 1 | 222 | 0.6567 |
0.758 |
| 2anu-assembly1.cif.gz_A | 8 | 274 | 1 | 223 | 0.6531 |
0.7542 |
| 2anu-assembly2.cif.gz_F | 8 | 274 | 1 | 223 | 0.6525 |
0.7536 |
| 3e38-assembly1.cif.gz_B | 1 | 282 | 8 | 333 | 0.6319 |
0.72 |
| 7ug9-assembly1.cif.gz_A | 12 | 204 | 1 | 206 | 0.6184 |
0.7833 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57860-F1-model_v4 | 11 | 281 | 1 | 211 | 0.634 |
0.796 |
| AF-Q9PJW8-F1-model_v4 | 1 | 288 | 168 | 621 | 0.5972 |
0.8287 |
| AF-O84432-F1-model_v4 | 1 | 288 | 168 | 621 | 0.5968 |
0.828 |
| AF-Q9Z840-F1-model_v4 | 1 | 288 | 168 | 620 | 0.5938 |
0.8233 |