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PROTEIN: HRGMv2_2318_42_7

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2318_42_7.pdb
Genome ID:
HRGMv2_2318
Protein ID:
HRGMv2_2318_42_7

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKIVSGTLV   ALMVASSMVG   CTSDQGGEKE   TASNSSKDTG   SSKEPVINAY   GWEVPDETLV 60
INVYAGQGSP   DSMKEDTEAL   NAYLKEEFNV   VVNKFVYDTD   QSERLNLMLA   SNDYPEAIMG 120
LSQQTVEQWK   ELGKVLELTD   LVQDQPNLMQ   KFGPYIPRFE   DEEGRLWNLS   TGYYGIDQNN 180
IIPCADYAPM   IREDWYKEIG   SPDISTPQGY   FDAIKKIVEK   HPETPSGHKV   YGLATYKTAP 240
ALSQMLNTNV   GGAFGLKNGF   EISENGDFKH   WVNSDIGLEV   VKYINQFARA   GLLDPDSLTQ 300
TVEEWGQKGT   DERYAAYVGP   WWQPGYYISD   NWMKKMEAEK   PGSYPEDMRY   VHYLVKDPDI 360
EQATYNGYST   LGWGRVILTD   KCENPEDYMR   WFDFENSDLG   TKLLGYGVPN   QPDSIWDFNE 420
ETGEATFRAD   KVEQITSATP   TFDFEPYMKL   GGECALQISF   GSDKLADGTN   CWFNQSNKDP 480
WKELKDERLK   DTMYDATAIS   AVVFDPFDPL   TDTRQRCIDI   VSSGWSRAIF   AKTEEECEAI 540
YMETREKANK   AGMQEVEAYY   SQEYKKNLEQ   WEN 573
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133D019-F1-model_v4 12 570 14 485 0.7028 0.7961
AF-A0A133CZN8-F1-model_v4 22 570 13 502 0.6979 0.7797
AF-K0F8J3-F1-model_v4 18 559 14 435 0.633 0.7549
AF-Q8DNU2-F1-model_v4 53 563 34 445 0.6321 0.777
AF-A0A133CPC5-F1-model_v4 36 559 25 423 0.6309 0.7775
AF-A0A0H3GX53-F1-model_v4 38 560 17 428 0.6307 0.7619
AF-K0F7X1-F1-model_v4 22 559 10 409 0.6295 0.7628
AF-Q8DRJ6-F1-model_v4 33 573 56 514 0.6287 0.7508
AF-O53485-F1-model_v4 25 560 26 439 0.6284 0.7635
AF-A0A133CDW9-F1-model_v4 21 562 26 444 0.6234 0.7544
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 45 570 42 506 0.7308 0.854
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 560 1 797 0.5127 0.6171
AF-A0A7U1BNH7-F1-model_v4 GH10 36 566 23 744 0.4883 0.5987
A0A9Q8PNJ5 GH4 1 559 103 866 0.4784 0.5945
AF-A0A1B0VLS2-F1-model_v4 CBM0 23 573 525 967 0.4454 0.7035
A0A242CSU4 CBM35 1 573 502 998 0.4391 0.6344
UJP10085.1 GH154 13 532 405 1168 0.3614 0.5611
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 45 570 42 506 0.7308 0.854
A0A1Q2TKJ3 GH49 1 560 1 797 0.5127 0.6171
A0A7U1BNH7 GH10 36 566 23 744 0.4883 0.5987
A0A9Q8PNJ5 GH4 1 559 103 866 0.4784 0.5945
A0A242CSU4 CBM35 1 573 502 998 0.4391 0.6344
UJP10085.1 GH154 13 532 405 1168 0.3614 0.5611
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5xs8-assembly1.cif.gz_A 58 564 1 474 0.7721 0.8586
5g62-assembly2.cif.gz_B 57 573 1 491 0.7639 0.8385
4tqu-assembly1.cif.gz_Q 46 572 1 492 0.761 0.8346
6jhx-assembly2.cif.gz_B 46 569 1 483 0.7596 0.8389
5h6u-assembly1.cif.gz_A 52 569 1 487 0.7583 0.8352
3vlw-assembly2.cif.gz_B 46 569 1 489 0.7577 0.8335
6fth-assembly1.cif.gz_A 35 570 1 496 0.7295 0.7983
3omb-assembly1.cif.gz_A 32 569 1 503 0.7241 0.7879
5g5y-assembly1.cif.gz_A 41 573 1 494 0.6997 0.7713
5suo-assembly1.cif.gz_A 57 572 1 451 0.6937 0.7911
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 37 569 26 502 0.7272 0.8284
AF-A0A0H2URD6-F1-model_v4 29 573 26 538 0.7069 0.7816
AF-Q2YKZ9-F1-model_v4 34 559 19 411 0.6566 0.809
AF-Q8FVS7-F1-model_v4 34 559 19 411 0.6563 0.8087
AF-Q578M8-F1-model_v4 34 559 19 411 0.6558 0.8082
AF-A0A0H2UMY0-F1-model_v4 7 573 13 491 0.6482 0.7328
AF-Q795R2-F1-model_v4 15 570 5 498 0.6457 0.7155
AF-Q7LYW7-F1-model_v4 40 562 33 450 0.6445 0.786
AF-O32156-F1-model_v4 31 559 25 421 0.6223 0.7704
AF-O58758-F1-model_v4 20 559 1 420 0.621 0.7312
Download Full SwissProt Results