PROTEIN: HRGMv2_2318_30_10
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Protein File & Metadata
Source:
HRGMv2_2318_30_10.pdb
Genome ID:
Protein ID:
HRGMv2_2318_30_10
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Protein Sequence
MNKNFKKALT LGLACTMILT GCAGGQEGSE TETAGKGSES DSVVIRFGSH AGNSMNPDYK 60 DPVTGEYAMS EEYREITLAA MKKVEDELNV KIEWVQFPGE TTEVLLQSVM AGDPVADVVN 120 LYANSQGTIL GQNILQPLDD YLEYFNEEAP AALYGKHYFL SVAGDYTHPL SPLFYNIDYI 180 EQVDALKENG KTVYPTDLYK AGKWTWSTFE DYLAKIEAHY ANSQAPERPE KRIDAYRTDY 240 TETLIQAMHS AGGSIYGDEG LAIESQETKD AVAFVQRLVD KKLLVCELKE GTSNRPYNAQ 300 GAPFNQGESV FTNIEDWRSG EAATKAAERG QSIGFIPFPR PDHMEFDDPN YRQVRTGGES 360 WGILRGVDEE KIPLAIQAYE MFMTEQSALK EELEAGTSSE IKLVIDIYHP EIGADMEAIY 420 KESIARTKVN EFSNMTGVYW DFMQIAGDAI YGIGGSPSYD VAIEAKKALI TDKISTVEKL 480 LNTTEAKDNI PPAFTEIEAG KSYTLPVGTD PSSIEWSANY TVADNLDGEL DASQMTIDTS 540 AVDFNTPGIY QGGVIGTLKD SNDNEGKVKI NVVIYDANNT TAPTLTAKEA PRTIALNEDT 600 ATINWANDFV ETAVDKDGLD LKANVVADLS ELDTTTAGTY NVVISVTDYA GNEASQTVEV 660 VVE 663
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GKJ8-F1-model_v4 | 26 | 480 | 10 | 410 | 0.5767 |
0.7356 |
| AF-P71619-F1-model_v4 | 42 | 484 | 34 | 435 | 0.5575 |
0.732 |
| AF-Q8DNU8-F1-model_v4 | 37 | 480 | 34 | 442 | 0.5548 |
0.722 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3quf-assembly1.cif.gz_A | 40 | 473 | 1 | 385 | 0.6025 |
0.7699 |
| 6dtr-assembly1.cif.gz_A | 42 | 476 | 1 | 393 | 0.5959 |
0.7567 |
| 4jxi-assembly2.cif.gz_B | 41 | 476 | 1 | 405 | 0.5893 |
0.7409 |
| 3u1o-assembly2.cif.gz_B | 39 | 476 | 1 | 407 | 0.5878 |
0.7374 |
| 4gqo-assembly1.cif.gz_A | 42 | 472 | 1 | 404 | 0.586 |
0.7365 |
| 4mfi-assembly1.cif.gz_A | 41 | 483 | 4 | 403 | 0.586 |
0.7427 |
| 7v09-assembly2.cif.gz_B | 41 | 476 | 1 | 403 | 0.5778 |
0.7271 |
| 5ixp-assembly1.cif.gz_A | 42 | 472 | 1 | 393 | 0.5759 |
0.7323 |
| 5k2y-assembly2.cif.gz_B | 44 | 474 | 1 | 400 | 0.5733 |
0.724 |
| 7mhw-assembly1.cif.gz_A | 41 | 620 | 3 | 460 | 0.5631 |
0.685 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P94528-F1-model_v4 | 42 | 476 | 32 | 433 | 0.5537 |
0.7243 |
| AF-Q795R2-F1-model_v4 | 35 | 482 | 31 | 494 | 0.549 |
0.6992 |