PROTEIN: HRGMv2_2305_21_11
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Protein File & Metadata
Source:
HRGMv2_2305_21_11.pdb
Genome ID:
Protein ID:
HRGMv2_2305_21_11
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Protein Sequence
MMKKKVKNIA GIGILIIVAF FYAHIAKVHN IYDKDVDASE YGNTGIVTDL GVQQEFVCAE 60 EHLDGVRIKS TVTESADEVT LEYTLKNLST GETVAAGQVE GAQVKNSKFF ELPFETVENC 120 KDTPFELSVY SNVPIGTATG VGFAYEKTKE EDTALRVAGE EVENGTLIMK TVTHRFDFET 180 FFVFLAFSLY VIIFMGFLYK IFK 203
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9H0C5-F1-model_v4 | 2 | 175 | 123 | 482 | 0.4187 |
0.6814 |
| AF-A0A3P7EV02-F1-model_v4 | 13 | 203 | 149 | 1916 | 0.3302 |
0.6704 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1S8M8R4-F1-model_v4 | GT2 , GT4 | 1 | 178 | 403 | 945 | 0.4287 |
0.8218 |
| AF-Q97GN9-F1-model_v4 | GT0 , GT2 | 2 | 178 | 522 | 944 | 0.4253 |
0.8198 |
| AF-A0A0E3PR73-F1-model_v4 | GT2 | 1 | 203 | 185 | 1066 | 0.4245 |
0.7317 |
| AF-A0A0E3QJR3-F1-model_v4 | GT2 | 12 | 202 | 77 | 735 | 0.4199 |
0.7132 |
| AF-A0A0E3L941-F1-model_v4 | GT2 | 11 | 203 | 299 | 1099 | 0.416 |
0.7528 |
| AF-R4K848-F1-model_v4 | GT0 , GT2 | 4 | 178 | 531 | 926 | 0.4155 |
0.8039 |
| AF-A0A0H3J786-F1-model_v4 | GT0 , GT2 | 15 | 179 | 534 | 939 | 0.4006 |
0.8228 |
| AF-A0A0E3PHH4-F1-model_v4 | GT2 | 21 | 202 | 426 | 1084 | 0.394 |
0.7519 |
| AF-D2RDR5-F1-model_v4 | GT2 | 1 | 180 | 126 | 603 | 0.39 |
0.7533 |
| A0A136Q663 | GT2 | 18 | 189 | 48 | 428 | 0.3827 |
0.7111 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0E3PR73 | GT2 | 1 | 203 | 185 | 1066 | 0.4245 |
0.7317 |
| A0A0E3L941 | GT2 | 11 | 203 | 299 | 1099 | 0.416 |
0.7528 |
| D2RDR5 | GT2 | 1 | 180 | 126 | 603 | 0.39 |
0.7533 |
| A0A136Q663 | GT2 | 18 | 189 | 48 | 428 | 0.3827 |
0.7111 |
| A0A2P8MIG1 | GT0 , GT2 | 35 | 179 | 791 | 945 | 0.37 |
0.8607 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9H0C5-F1-model_v4 | 2 | 175 | 123 | 482 | 0.4187 |
0.6814 |